C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ZO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039957-ENSDARG00000053225 CGP 7955 16:36087312-36342062
GeneTranscriptPositionBiotype
ENSDARG00000039957 (rspo1)
R-spondin homolog (Xenopus laevis) 		ENSDART00000058459 (rspo1-001) 36087312-36131543 protein_coding
ENSDARG00000053225 (gnl2)
guanine nucleotide binding protein-like 2 (nucleolar) 		ENSDART00000075222 (gnl2-201) 36207421-36342062 protein_coding
ENSDART00000125722 (gnl2-001) 36207345-36233237 protein_coding
ENSDART00000150779 (gnl2-002) 36207401-36227346 protein_coding
ENSDARG00000069820 (gpn2)
GPN-loop GTPase 2 		ENSDART00000101912 (gpn2-001) 36245928-36251431 protein_coding
ENSDART00000124404 (gpn2-201) 36245937-36359779 protein_coding
ENSDART00000132382 (gpn2-002) 36247714-36251431 retained_intron
ENSDARG00000079879 (arid1aa)
AT rich interactive domain 1Aa (SWI-like) 		ENSDART00000084263 (arid1aa-201) 36369831-36402982 protein_coding
ENSDART00000135930 (arid1aa-001) 36261504-36402983 protein_coding
ENSDARG00000086593 (snip1)
Smad nuclear interacting protein 		ENSDART00000123734 (snip1-001) 36238220-36245624 protein_coding
ENSDART00000137223 (snip1-002) 36238388-36245063 protein_coding
ENSDARG00000090484 (dnali1)
dynein, axonemal, light intermediate chain 1 		ENSDART00000128950 (dnali1-001) 36233103-36237441 protein_coding
ENSDART00000150511 (dnali1-002) 36234232-36237425 protein_coding
CIL_0001ZO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028871-ENSMUSG00000028869 CGP 10090 4:124986430-125055380
GeneTranscriptPositionBiotype
ENSMUSG00000028869 (Gnl2)
guanine nucleotide binding protein-like 2 (nucleolar) 		ENSMUST00000030684 (Gnl2-001) 125029992-125055376 protein_coding
ENSMUST00000106176 (Gnl2-002) 125016585-125037579 protein_coding
ENSMUST00000125078 (Gnl2-004) 125040958-125042920 processed_transcript
ENSMUST00000136910 (Gnl2-003) 125030058-125041244 processed_transcript
ENSMUST00000147390 (Gnl2-005) 125043232-125046264 processed_transcript
ENSMUST00000147550 (Gnl2-006) 125053151-125055380 processed_transcript
ENSMUSG00000028871 (Rspo1)
R-spondin homolog (Xenopus laevis) 		ENSMUST00000030687 (Rspo1-001) 124986430-125009099 protein_coding
ENSMUST00000140698 (Rspo1-002) 125007480-125008525 processed_transcript
ENSMUSG00000042707 (Dnali1)
dynein, axonemal, light intermediate polypeptide 1 		ENSMUST00000036383 (Dnali1-001) 125055338-125065703 protein_coding
ENSMUSG00000080934 (Gm12931)
predicted gene 12931 		ENSMUST00000117046 (Gm12931-001) 125019500-125019823 processed_pseudogene
ENSMUSG00000087011 (Gm12930)
predicted gene 12930 		ENSMUST00000146679 (Gm12930-001) 124957647-124987009 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZO_0001ENSDARG00000039957ENSDART00000058459ENSDARG00000053225ENSDART00000075222ENSDART00000125722ENSDART00000150779ENSDARG00000069820ENSDART00000101912ENSDART00000124404ENSDART00000132382ENSDARG00000079879ENSDART00000084263ENSDART00000135930ENSDARG00000086593ENSDART00000123734ENSDART00000137223ENSDARG00000090484ENSDART00000128950ENSDART00000150511CIL_0001ZO_0002ENSMUSG00000028869ENSMUST00000030684ENSMUST00000106176ENSMUST00000125078ENSMUST00000136910ENSMUST00000147390ENSMUST00000147550ENSMUSG00000028871ENSMUST00000030687ENSMUST00000140698ENSMUSG00000042707ENSMUST00000036383ENSMUSG00000080934ENSMUST00000117046ENSMUSG00000087011ENSMUST00000146679
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZO_0001ENSDARG00000039957ENSDART00000058459ENSDARG00000053225ENSDART00000075222ENSDART00000125722ENSDART00000150779ENSDARG00000069820ENSDART00000101912ENSDART00000124404ENSDART00000132382ENSDARG00000079879ENSDART00000084263ENSDART00000135930ENSDARG00000086593ENSDART00000123734ENSDART00000137223ENSDARG00000090484ENSDART00000128950ENSDART00000150511CIL_0001ZO_0002ENSMUSG00000028869ENSMUST00000030684ENSMUST00000106176ENSMUST00000136910ENSMUST00000147550ENSMUSG00000028871ENSMUST00000030687ENSMUST00000140698ENSMUSG00000042707ENSMUST00000036383ENSMUSG00000080934ENSMUST00000117046ENSMUSG00000087011ENSMUST00000146679
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039957 ENSDART00000058459 N/A N/A N/A 0.683±0.30 N/A N/A 1.297±0.82 9.657±3.35 0.018±0.00 N/A 3.021±0.00 N/A N/A N/A
ENSDARG00000053225 ENSDART00000075222 N/A N/A N/A 1.087±0.11 N/A N/A 1.139±0.41 1.568±1.48 1.289±0.00 N/A 1.345±0.00 N/A N/A N/A
ENSDART00000125722 N/A N/A N/A 0.782±0.31 N/A N/A 0.938±0.45 1.217±1.09 1.216±0.00 N/A 1.662±0.00 N/A N/A N/A
ENSDART00000150779 N/A N/A N/A N/A N/A N/A 1.838±0.14 N/A 2.339±0.00 N/A N/A N/A N/A N/A
ENSDARG00000069820 ENSDART00000101912 N/A N/A N/A 0.375±0.14 N/A N/A 1.725±1.90 11.125±7.81 N/A N/A 1.039±0.00 N/A N/A N/A
ENSDART00000124404 N/A N/A N/A 0.347±0.06 N/A N/A 0.420±0.26 0.978±0.00 0.047±0.00 N/A N/A N/A N/A N/A
ENSDART00000132382 N/A N/A N/A 0.536±0.24 N/A N/A 0.628±0.40 0.295±0.00 0.216±0.00 N/A 2.152±0.00 N/A N/A N/A
ENSDARG00000079879 ENSDART00000084263 N/A N/A N/A 7.381±4.15 N/A N/A 1.926±1.95 4.057±0.00 0.847±0.00 N/A 2.907±0.00 N/A N/A N/A
ENSDART00000135930 N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086593 ENSDART00000123734 N/A N/A N/A 4.379±2.89 N/A N/A 6.182±5.16 17.093±10.77 0.146±0.00 N/A 0.416±0.00 N/A N/A N/A
ENSDART00000137223 N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A
ENSDARG00000090484 ENSDART00000128950 N/A N/A N/A N/A N/A N/A N/A 1.799±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000150511 N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028869 ENSMUST00000030684 9.488±2.17 5.318±0.93 16.176±1.66 16.770±2.61 5.745±1.90 4.713±0.82 4.977±0.72 6.300±0.85 10.135±6.22 7.120±1.92 12.868±0.60 15.349±11.74 23.127±9.80 32.531±0.00
ENSMUST00000106176 N/A N/A N/A N/A N/A 2.839±0.22 N/A 5.075±0.00 1.973±0.00 N/A N/A N/A N/A N/A
ENSMUST00000125078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136910 N/A N/A N/A N/A N/A N/A N/A N/A 5.266±0.62 N/A N/A N/A N/A N/A
ENSMUST00000147390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147550 N/A N/A N/A 47.884±0.00 N/A N/A N/A N/A N/A N/A N/A 101.522±0.00 90.810±35.71 85.068±0.00
ENSMUSG00000028871 ENSMUST00000030687 11.947±6.12 2.858±0.34 2.460±0.70 3.219±2.29 0.990±0.18 1.557±0.22 1.425±0.30 0.722±0.15 0.449±0.31 7.623±1.20 0.081±0.04 12.458±1.41 0.827±1.13 0.502±0.10
ENSMUST00000140698 N/A N/A N/A N/A N/A N/A N/A 0.560±0.03 0.443±0.00 N/A 0.155±0.05 N/A 0.338±0.00 N/A
ENSMUSG00000042707 ENSMUST00000036383 N/A N/A N/A N/A N/A N/A 0.768±0.03 N/A N/A 8.288±0.96 N/A 10.357±1.87 N/A 99.873±5.49
ENSMUSG00000080934 ENSMUST00000117046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A
ENSMUSG00000087011 ENSMUST00000146679 0.140±0.00 0.260±0.00 0.014±0.00 0.423±0.00 0.654±0.40 0.157±0.01 N/A 0.206±0.05 0.032±0.00 0.184±0.05 0.081±0.00 0.545±0.31 0.023±0.00 0.177±0.07

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