C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028879 Stx12 10090 - 4:132853501-132884509 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030698 Stx12-001 132853501-132884509 protein_coding
  ENSMUST00000137109 Stx12-002 132857046-132863260 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030698ENSMUST00000137109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030698 21.305±3.62 22.369±6.43 37.000±7.31 37.120±14.28 12.713±3.28 16.022±0.94 10.557±0.41 12.698±1.71 8.467±2.92 24.197±3.23 10.006±0.32 15.181±2.84 24.873±6.10 9.063±3.23
ENSMUST00000137109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.320±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0002 VISTA 4:132816592-133418424

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000149 IBA SNARE binding
GO:0005484 IBA SNAP receptor activity
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0006886 IBA intracellular protein transport
GO:0016021 IEA integral component of membrane
GO:0016079 IBA synaptic vesicle exocytosis
GO:0031083 ISS BLOC-1 complex
GO:0031201 ISS SNARE complex
GO:0033344 IEA cholesterol efflux
GO:0045121 IEA membrane raft
GO:0045335 IEA phagocytic vesicle
GO:0050821 IEA protein stabilization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010290 stx12 syntaxin 12 protein_coding Danio_rerio
ENSDARG00000044605 stx12l syntaxin 12, like protein_coding Danio_rerio
ENSG00000117758 STX12 syntaxin 12 protein_coding Homo_sapiens

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