C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030698 Stx12-001 ENSMUSG00000028879 10090 - 4:132853501-132884509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030698
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030698 21.305±3.62 22.369±6.43 37.000±7.31 37.120±14.28 12.713±3.28 16.022±0.94 10.557±0.41 12.698±1.71 8.467±2.92 24.197±3.23 10.006±0.32 15.181±2.84 24.873±6.10 9.063±3.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0002 VISTA 4:132816592-133418424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IBA SNARE binding
GO:0005484 IBA SNAP receptor activity
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0006886 IBA intracellular protein transport
GO:0016021 IEA integral component of membrane
GO:0016079 IBA synaptic vesicle exocytosis
GO:0031083 ISS BLOC-1 complex
GO:0031201 ISS SNARE complex
GO:0033344 IEA cholesterol efflux
GO:0045121 IEA membrane raft
GO:0045335 IEA phagocytic vesicle
GO:0050821 IEA protein stabilization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373943 STX12-001 protein_coding Homo_sapiens 0 1825
ENST00000440806 STX12-002 protein_coding Homo_sapiens 0 675
ENST00000468761 STX12-003 processed_transcript Homo_sapiens 0 616
ENST00000472285 STX12-005 processed_transcript Homo_sapiens 0 302

Loading