C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 213, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030935 Fam213b-001 ENSMUSG00000029059 10090 - 4:154896399-154899110 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000030935
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000030935 68.627±49.14 43.430±9.03 14.355±0.35 18.699±12.98 23.230±10.57 7.195±2.37 38.440±1.70 38.557±4.22 9.959±5.28 5.728±1.18 105.658±9.77 18.346±9.20 3.316±1.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0002 VISTA 4:154471105-155072345
CIL_00058B CIL_00058B_0002 CGP 4:154869585-154899135

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001516 IDA prostaglandin biosynthetic process
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 IDA cytosol
GO:0016616 IDA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0043209 IDA myelin sheath
GO:0047017 IMP prostaglandin-F synthase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378424 FAM213B-002 protein_coding Homo_sapiens 0 329
ENST00000378425 FAM213B-201 protein_coding Homo_sapiens 0 379
ENST00000378427 FAM213B-003 protein_coding Homo_sapiens 0 477
ENST00000419916 FAM213B-001 protein_coding Homo_sapiens 0 579
ENST00000444521 FAM213B-202 protein_coding Homo_sapiens 0 329
ENST00000464043 FAM213B-009 processed_transcript Homo_sapiens 0 499
ENST00000465233 FAM213B-011 protein_coding Homo_sapiens 0 436
ENST00000474659 FAM213B-007 processed_transcript Homo_sapiens 0 425
ENST00000477045 FAM213B-013 processed_transcript Homo_sapiens 0 333
ENST00000481683 FAM213B-012 processed_transcript Homo_sapiens 0 455
ENST00000484099 FAM213B-004 processed_transcript Homo_sapiens 0 353
ENST00000493183 FAM213B-006 processed_transcript Homo_sapiens 0 527
ENST00000498083 FAM213B-010 protein_coding Homo_sapiens 0 381
ENST00000537325 FAM213B-014 protein_coding Homo_sapiens 0 379
ENST00000616280 FAM213B-203 protein_coding Homo_sapiens 0 329
ENST00000617400 FAM213B-204 protein_coding Homo_sapiens 0 379

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