C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mitochondrial ribosomal protein L20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030942 Mrpl20-001 ENSMUSG00000029066 10090 + 4:155803521-155808831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030942 71.402±13.91 46.503±11.02 24.455±2.91 31.658±7.16 34.695±11.02 34.253±3.42 27.408±6.17 59.055±1.39 30.983±12.08 30.255±2.64 27.207±5.60 28.748±10.45 26.983±14.67 63.637±4.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005761 ISS mitochondrial ribosome
GO:0006412 IEA translation
GO:0019843 IEA rRNA binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344843 MRPL20-001 protein_coding Homo_sapiens 0 407
ENST00000400819 MRPL20P1-001 processed_pseudogene Homo_sapiens 0 239
ENST00000482352 MRPL20-003 protein_coding Homo_sapiens 0 213
ENST00000487659 MRPL20-002 retained_intron Homo_sapiens 0 267
ENST00000492508 MRPL20-004 protein_coding Homo_sapiens 3e-21 106
ENST00000493287 MRPL20-006 processed_transcript Homo_sapiens 0 267

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