C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: matrix-remodelling associated 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030947 Mxra8-001 ENSMUSG00000029070 10090 + 4:155839726-155844088 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030947
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030947 116.774±14.76 37.777±8.17 117.581±24.49 6.454±4.04 61.083±15.06 44.031±8.84 28.644±3.76 31.074±2.35 5.253±1.78 319.015±57.51 6.192±1.74 89.024±37.21 12.841±4.74 39.654±21.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003D0 CIL_0003D0_0002 CGP 4:155831272-155844088
CIL_0003D7 CIL_0003D7_0002 CGP 4:155839680-155859303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0060857 IEP establishment of glial blood-brain barrier
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309212 MXRA8-001 protein_coding Homo_sapiens 0 909
ENST00000342753 MXRA8-201 protein_coding Homo_sapiens 0 647
ENST00000445648 MXRA8-003 protein_coding Homo_sapiens 0 776
ENST00000460473 MXRA8-005 retained_intron Homo_sapiens 3e-24 115
ENST00000464351 MXRA8-006 retained_intron Homo_sapiens 1e-33 147
ENST00000473097 MXRA8-007 retained_intron Homo_sapiens 0 230
ENST00000474033 MXRA8-004 retained_intron Homo_sapiens 0 217
ENST00000476718 MXRA8-009 retained_intron Homo_sapiens 0 217
ENST00000477278 MXRA8-002 protein_coding Homo_sapiens 0 865
ENST00000478517 MXRA8-008 retained_intron Homo_sapiens 2e-39 167

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