C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of G-protein signaling 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029101 Rgs12 10090 + 5:34949445-35039644 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030984 Rgs12-001 34949445-35033595 protein_coding
  ENSMUST00000087684 Rgs12-005 34964773-35039644 protein_coding
  ENSMUST00000114280 Rgs12-007 34999078-35033104 protein_coding
  ENSMUST00000114281 Rgs12-002 34999057-35033591 protein_coding
  ENSMUST00000114283 Rgs12-006 34999184-35039635 protein_coding
  ENSMUST00000114284 Rgs12-003 34989473-35033442 protein_coding
  ENSMUST00000114285 Rgs12-008 34989549-35039635 protein_coding
  ENSMUST00000128161 Rgs12-004 34949448-35020094 retained_intron
  ENSMUST00000135403 Rgs12-011 35022831-35024336 retained_intron
  ENSMUST00000141562 Rgs12-010 35020113-35022662 retained_intron
  ENSMUST00000150139 Rgs12-014 35026970-35039636 protein_coding
  ENSMUST00000153972 Rgs12-009 34974992-35019505 processed_transcript
  ENSMUST00000155162 Rgs12-012 35026903-35032052 processed_transcript
  ENSMUST00000156339 Rgs12-015 34989128-35023172 protein_coding
  ENSMUST00000156819 Rgs12-013 35024341-35030090 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030984ENSMUST00000087684ENSMUST00000114280ENSMUST00000114281ENSMUST00000114283ENSMUST00000114284ENSMUST00000114285ENSMUST00000128161ENSMUST00000155162ENSMUST00000156819
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030984 3.554±0.39 4.601±1.55 2.241±0.00 13.015±1.59 1.734±0.50 1.099±0.18 3.897±0.75 2.014±0.57 2.270±1.45 15.581±2.71 0.347±0.13 11.213±3.03 1.923±0.60 7.815±3.01
ENSMUST00000087684 1.280±0.00 1.587±0.02 N/A 2.406±0.00 1.077±0.00 0.633±0.20 N/A N/A N/A 3.931±0.00 0.262±0.06 4.298±1.68 N/A 5.931±0.00
ENSMUST00000114280 N/A N/A 4.602±1.70 N/A N/A N/A N/A N/A 1.778±1.03 N/A 0.307±0.05 N/A 1.794±0.26 N/A
ENSMUST00000114281 1.065±0.00 N/A 11.384±1.63 5.549±0.22 2.052±0.94 0.737±0.00 N/A 1.148±0.21 3.678±3.74 11.333±2.98 N/A N/A 0.905±0.00 N/A
ENSMUST00000114283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A 2.766±0.00 N/A
ENSMUST00000114284 N/A N/A N/A 4.522±0.00 N/A N/A 1.203±0.02 N/A 0.610±0.16 6.067±0.00 N/A N/A 2.692±0.46 N/A
ENSMUST00000114285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.813±0.27 N/A
ENSMUST00000128161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.139±0.00 N/A N/A
ENSMUST00000155162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.060±0.00 N/A
ENSMUST00000156819 N/A N/A N/A 30.824±0.00 N/A N/A N/A N/A N/A N/A N/A 73.953±0.00 18.512±2.10 28.910±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z3 CIL_0003Z3_0002 CGP 5:34915915-35039644
CIL_0001XB CIL_0001XB_0002 CGP 5:34949445-35048436

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005057 IEA receptor signaling protein activity
GO:0005096 IBA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0035556 IEA intracellular signal transduction
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009610 rgs12a regulator of G-protein signaling 12a protein_coding Danio_rerio
ENSDARG00000036774 rgs12b regulator of G-protein signaling 12b protein_coding Danio_rerio
ENSG00000159788 RGS12 regulator of G-protein signaling 12 protein_coding Homo_sapiens

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