C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087684 Rgs12-005 ENSMUSG00000029101 10090 + 5:34964773-35039644 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungMuscleOvaryTestisENSMUST00000087684
Transcript ID Adipose Adrenal Brain Breast Colon Lung Muscle Ovary Testis
ENSMUST00000087684 1.280±0.00 1.587±0.02 2.406±0.00 1.077±0.00 0.633±0.20 3.931±0.00 0.262±0.06 4.298±1.68 5.931±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z3 CIL_0003Z3_0002 CGP 5:34915915-35039644
CIL_0001XB CIL_0001XB_0002 CGP 5:34949445-35048436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005057 IEA receptor signaling protein activity
GO:0005096 IBA GTPase activator activity
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0035556 IEA intracellular signal transduction
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336727 RGS12-201 protein_coding Homo_sapiens 0 3493
ENST00000338806 RGS12-003 protein_coding Homo_sapiens 0 1929
ENST00000344733 RGS12-001 protein_coding Homo_sapiens 0 3493
ENST00000382788 RGS12-002 protein_coding Homo_sapiens 0 3493
ENST00000503041 RGS12-019 processed_transcript Homo_sapiens 0 357
ENST00000504194 RGS12-008 retained_intron Homo_sapiens 0 1687
ENST00000504559 RGS12-024 processed_transcript Homo_sapiens 0 217
ENST00000505570 RGS12-017 processed_transcript Homo_sapiens 0 243
ENST00000506631 RGS12-009 retained_intron Homo_sapiens 0 957
ENST00000506998 RGS12-005 retained_intron Homo_sapiens 0 867
ENST00000507041 RGS12-021 retained_intron Homo_sapiens 0 436
ENST00000507246 RGS12-026 processed_transcript Homo_sapiens 0 315
ENST00000508158 RGS12-015 processed_transcript Homo_sapiens 0 1495
ENST00000509746 RGS12-027 retained_intron Homo_sapiens 0 311
ENST00000511709 RGS12-025 processed_transcript Homo_sapiens 0 285
ENST00000512266 RGS12-006 retained_intron Homo_sapiens 0 747
ENST00000512990 RGS12-018 processed_transcript Homo_sapiens 0 243
ENST00000513784 RGS12-013 processed_transcript Homo_sapiens 0 604
ENST00000513991 RGS12-004 retained_intron Homo_sapiens 0 1459
ENST00000514268 RGS12-011 nonsense_mediated_decay Homo_sapiens 0 2239
ENST00000515521 RGS12-023 processed_transcript Homo_sapiens 0 586

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