C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuron specific gene family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029126 Nsg1 10090 - 5:38137193-38159467 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031009 Nsg1-201 38137193-38159467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031009
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031009 8.964±3.32 15.397±0.93 7.590±0.42 158.478±76.98 3.934±0.67 5.758±0.58 2.998±0.90 4.483±0.45 1.676±0.37 24.319±1.82 0.796±0.14 10.918±2.39 2.802±0.00 13.207±5.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DJ CIL_0008DJ_0002 VISTA 5:37551391-38152218
CIL_000969 CIL_000969_0002 VISTA 5:37601106-38202493
CIL_00096C CIL_00096C_0002 VISTA 5:37617742-38218594
CIL_00096B CIL_00096B_0002 VISTA 5:37667623-38269196
CIL_0008QQ CIL_0008QQ_0002 VISTA 5:37760247-38361421
CIL_00096M CIL_00096M_0002 VISTA 5:37765055-38366694
CIL_0008ZA CIL_0008ZA_0002 VISTA 5:37806142-38406996

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005768 IDA endosome
GO:0005794 IEA Golgi apparatus
GO:0007212 IEA dopamine receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0016328 IDA lateral plasma membrane
GO:0032051 IEA clathrin light chain binding
GO:0045211 IDA postsynaptic membrane
GO:0048268 IEA clathrin coat assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000168824 D4S234E Neuron-specific protein family member 1 protein_coding Homo_sapiens

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