C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucosamine-6-phosphate deaminase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029209 Gnpda2 10090 - 5:69573108-69592337 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031117 Gnpda2-001 69575001-69592337 protein_coding
  ENSMUST00000120789 Gnpda2-002 69576742-69592293 protein_coding
  ENSMUST00000139632 Gnpda2-003 69573108-69590827 nonsense_mediated_decay
  ENSMUST00000144203 Gnpda2-006 69579517-69592218 processed_transcript
  ENSMUST00000145775 Gnpda2-005 69575947-69592231 processed_transcript
  ENSMUST00000153536 Gnpda2-007 69585001-69592289 nonsense_mediated_decay
  ENSMUST00000154018 Gnpda2-004 69575175-69592246 retained_intron
  ENSMUST00000166298 Gnpda2-201 69575010-69592296 protein_coding
  ENSMUST00000173927 Gnpda2-009 69575812-69590791 protein_coding
  ENSMUST00000174233 Gnpda2-008 69579556-69592274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031117ENSMUST00000139632ENSMUST00000153536ENSMUST00000166298ENSMUST00000173927ENSMUST00000174233
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031117 4.933±1.91 N/A 17.688±0.02 9.707±0.00 N/A N/A 3.115±1.10 5.253±0.65 3.235±0.94 8.612±1.42 1.682±0.21 10.414±5.43 5.035±1.30 7.727±2.68
ENSMUST00000139632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.580±0.00
ENSMUST00000153536 N/A 42.346±0.00 N/A N/A 10.927±1.20 11.517±3.88 N/A 11.914±0.00 N/A 18.313±0.03 N/A 17.351±0.12 N/A 12.441±0.00
ENSMUST00000166298 5.179±0.09 N/A N/A N/A 5.363±0.84 4.738±0.71 2.732±0.56 3.092±0.00 1.922±0.00 N/A N/A 8.982±1.86 N/A N/A
ENSMUST00000173927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.031±0.82
ENSMUST00000174233 N/A N/A N/A N/A 11.301±0.00 N/A 7.431±0.00 10.708±1.50 N/A N/A N/A N/A N/A 17.420±5.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YZ CIL_0002YZ_0002 CGP 5:69516675-69575972
CIL_0005LN CIL_0005LN_0003 CGP 5:69556924-69592337
CIL_0002YW CIL_0002YW_0002 CGP 5:69573108-70842617

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004342 ISA glucosamine-6-phosphate deaminase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005975 IEA carbohydrate metabolic process
GO:0006044 IEA N-acetylglucosamine metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024443 gnpda2 glucosamine-6-phosphate deaminase 2 protein_coding Danio_rerio
ENSG00000163281 GNPDA2 glucosamine-6-phosphate deaminase 2 protein_coding Homo_sapiens

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