C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosamine-6-phosphate deaminase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153536 Gnpda2-007 ENSMUSG00000029209 10090 - 5:69585001-69592289 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryTestisENSMUST00000153536
Transcript ID Adrenal Breast Colon Kidney Lung Ovary Testis
ENSMUST00000153536 42.346±0.00 10.927±1.20 11.517±3.88 11.914±0.00 18.313±0.03 17.351±0.12 12.441±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YZ CIL_0002YZ_0002 CGP 5:69516675-69575972
CIL_0005LN CIL_0005LN_0003 CGP 5:69556924-69592337
CIL_0002YW CIL_0002YW_0002 CGP 5:69573108-70842617

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004342 ISA glucosamine-6-phosphate deaminase activity
GO:0006044 IEA N-acetylglucosamine metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295448 GNPDA2-001 protein_coding Homo_sapiens 4e-39 167
ENST00000507917 GNPDA2-002 protein_coding Homo_sapiens 5e-39 167
ENST00000509756 GNPDA2-006 protein_coding Homo_sapiens 1e-38 167

Loading