C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosamine-6-phosphate deaminase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031117 Gnpda2-001 ENSMUSG00000029209 10090 - 5:69575001-69592337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031117
Transcript ID Adipose Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031117 4.933±1.91 17.688±0.02 9.707±0.00 3.115±1.10 5.253±0.65 3.235±0.94 8.612±1.42 1.682±0.21 10.414±5.43 5.035±1.30 7.727±2.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YZ CIL_0002YZ_0002 CGP 5:69516675-69575972
CIL_0005LN CIL_0005LN_0003 CGP 5:69556924-69592337
CIL_0002YW CIL_0002YW_0002 CGP 5:69573108-70842617

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004342 ISA glucosamine-6-phosphate deaminase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005975 IEA carbohydrate metabolic process
GO:0006044 IEA N-acetylglucosamine metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295448 GNPDA2-001 protein_coding Homo_sapiens 0 1086
ENST00000507534 GNPDA2-005 protein_coding Homo_sapiens 0 922
ENST00000507917 GNPDA2-002 protein_coding Homo_sapiens 0 795
ENST00000509756 GNPDA2-006 protein_coding Homo_sapiens 0 996
ENST00000511187 GNPDA2-008 processed_transcript Homo_sapiens 0 235
ENST00000608855 GNPDA2-009 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000609092 GNPDA2-010 protein_coding Homo_sapiens 0 339

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