C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal transducing adaptor family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029254 Stap1 10090 + 5:86071746-86103993 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031171 Stap1-001 86071746-86103993 protein_coding
  ENSMUST00000123393 Stap1-002 86071750-86097699 retained_intron
  ENSMUST00000132546 Stap1-004 86071783-86086008 retained_intron
  ENSMUST00000138076 Stap1-005 86086458-86094761 processed_transcript
  ENSMUST00000151556 Stap1-003 86071774-86086012 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031171ENSMUST00000123393ENSMUST00000132546ENSMUST00000138076ENSMUST00000151556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031171 0.260±0.17 N/A 0.295±0.08 N/A 0.961±0.31 0.121±0.00 0.173±0.00 0.500±0.18 0.579±0.30 0.388±0.18 0.048±0.03 0.331±0.10 0.090±0.05 0.248±0.10
ENSMUST00000123393 0.063±0.01 0.127±0.01 N/A 0.025±0.00 0.639±0.13 0.076±0.00 0.035±0.01 0.061±0.00 N/A 0.133±0.01 N/A N/A 0.014±0.00 0.105±0.00
ENSMUST00000132546 N/A N/A N/A N/A 0.913±0.26 N/A N/A 0.165±0.00 N/A 0.308±0.11 0.162±0.00 N/A N/A 0.071±0.01
ENSMUST00000138076 0.163±0.00 N/A N/A N/A 1.505±0.00 N/A 0.175±0.07 0.333±0.21 0.251±0.18 0.412±0.05 N/A N/A 0.066±0.00 N/A
ENSMUST00000151556 0.117±0.04 N/A 0.075±0.00 N/A 1.118±0.59 0.067±0.01 0.056±0.04 0.059±0.00 0.042±0.00 0.218±0.06 0.020±0.00 0.149±0.07 0.028±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M7 CIL_0000M7_0002 CGP 5:86012043-86103993
CIL_0000M6 CIL_0000M6_0002 CGP 5:86071746-86172803

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 IDA SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0007169 IDA transmembrane receptor protein tyrosine kinase signaling pathway
GO:0009967 IDA positive regulation of signal transduction
GO:0030099 TAS myeloid cell differentiation
GO:0043234 ISO protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000035720 STAP1 signal transducing adaptor family member 1 protein_coding Homo_sapiens

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