C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000M7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145241-ENSG00000035720 CGP 9606 4:67471803-67607337
GeneTranscriptPositionBiotype
ENSG00000035720 (STAP1)
signal transducing adaptor family member 1
ENST00000265404 (STAP1-001) 67558728-67606898 protein_coding
ENST00000396225 (STAP1-002) 67558728-67607337 protein_coding
ENSG00000145241 (CENPC)
centromere protein C
ENST00000273853 (CENPC-001) 67471803-67545606 protein_coding
ENST00000506410 (CENPC-007) 67512050-67514245 retained_intron
ENST00000506882 (CENPC-003) 67472482-67545483 nonsense_mediated_decay
ENST00000507196 (CENPC-008) 67505030-67508919 retained_intron
ENST00000510189 (CENPC-004) 67493405-67545503 retained_intron
ENST00000513216 (CENPC-006) 67472477-67530866 nonsense_mediated_decay
ENST00000515140 (CENPC-005) 67474692-67495201 nonsense_mediated_decay
CIL_0000M7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029253-ENSMUSG00000029254 CGP 10090 5:86012043-86103993
GeneTranscriptPositionBiotype
ENSMUSG00000029253 (Cenpc1)
centromere protein C1
ENSMUST00000031170 (Cenpc1-201) 86012043-86065583 protein_coding
ENSMUSG00000029254 (Stap1)
signal transducing adaptor family member 1
ENSMUST00000031171 (Stap1-001) 86071746-86103993 protein_coding
ENSMUST00000123393 (Stap1-002) 86071750-86097699 retained_intron
ENSMUST00000132546 (Stap1-004) 86071783-86086008 retained_intron
ENSMUST00000138076 (Stap1-005) 86086458-86094761 processed_transcript
ENSMUST00000151556 (Stap1-003) 86071774-86086012 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M7_0001ENSG00000035720ENST00000265404ENST00000396225ENSG00000145241ENST00000273853ENST00000506410ENST00000506882ENST00000507196ENST00000510189ENST00000513216ENST00000515140CIL_0000M7_0002ENSMUSG00000029253ENSMUST00000031170ENSMUSG00000029254ENSMUST00000031171ENSMUST00000123393ENSMUST00000132546ENSMUST00000138076ENSMUST00000151556
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M7_0001ENSG00000035720ENST00000265404ENST00000396225ENSG00000145241ENST00000273853ENST00000506882ENST00000507196ENST00000510189ENST00000513216ENST00000515140CIL_0000M7_0002ENSMUSG00000029253ENSMUST00000031170ENSMUSG00000029254ENSMUST00000031171ENSMUST00000123393ENSMUST00000132546ENSMUST00000138076ENSMUST00000151556
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000035720 ENST00000265404 0.041±0.00 6.808±0.00 N/A 0.024±0.00 0.100±0.00 0.261±0.00 0.006±0.00 3.516±0.00 N/A 0.607±0.00 N/A 0.092±0.03 0.116±0.03 0.769±0.24
ENST00000396225 0.067±0.00 N/A 0.736±0.00 0.055±0.00 0.302±0.00 0.277±0.19 0.055±0.00 2.350±0.00 0.105±0.09 0.373±0.00 N/A 0.123±0.05 0.153±0.00 0.193±0.00
ENSG00000145241 ENST00000273853 0.757±0.00 1.027±0.00 N/A 0.432±0.00 1.237±0.00 1.299±0.97 0.585±0.00 0.645±0.08 1.648±1.46 1.209±0.98 N/A 1.868±0.92 0.226±0.03 1.315±0.33
ENST00000506410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506882 0.519±0.00 1.493±0.00 0.681±0.00 0.656±0.00 1.093±0.00 1.068±0.00 N/A N/A 0.105±0.00 2.188±0.00 N/A 1.110±0.00 0.263±0.08 1.086±0.00
ENST00000507196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.820±0.00 N/A N/A N/A
ENST00000510189 N/A N/A N/A N/A 1.453±0.00 1.565±0.00 0.836±0.00 1.177±0.00 1.592±0.00 2.405±0.00 N/A 1.568±0.44 0.288±0.00 2.504±0.00
ENST00000513216 0.755±0.00 1.943±0.00 N/A N/A 0.633±0.00 1.507±0.00 0.745±0.06 0.986±0.00 0.327±0.00 0.757±0.00 N/A 1.692±0.00 0.428±0.20 1.926±0.08
ENST00000515140 N/A N/A N/A N/A N/A N/A N/A N/A 0.537±0.00 N/A 0.558±0.00 1.532±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029253 ENSMUST00000031170 1.661±0.97 4.181±2.04 3.719±0.71 4.320±2.47 0.808±0.75 1.778±0.74 0.403±0.02 0.638±0.32 2.406±2.16 0.804±0.22 0.824±0.19 3.379±1.09 4.178±1.32 4.072±1.30
ENSMUSG00000029254 ENSMUST00000031171 0.260±0.17 N/A 0.295±0.08 N/A 0.961±0.31 0.121±0.00 0.173±0.00 0.500±0.18 0.579±0.30 0.388±0.18 0.048±0.03 0.331±0.10 0.090±0.05 0.248±0.10
ENSMUST00000123393 0.063±0.01 0.127±0.01 N/A 0.025±0.00 0.639±0.13 0.076±0.00 0.035±0.01 0.061±0.00 N/A 0.133±0.01 N/A N/A 0.014±0.00 0.105±0.00
ENSMUST00000132546 N/A N/A N/A N/A 0.913±0.26 N/A N/A 0.165±0.00 N/A 0.308±0.11 0.162±0.00 N/A N/A 0.071±0.01
ENSMUST00000138076 0.163±0.00 N/A N/A N/A 1.505±0.00 N/A 0.175±0.07 0.333±0.21 0.251±0.18 0.412±0.05 N/A N/A 0.066±0.00 N/A
ENSMUST00000151556 0.117±0.04 N/A 0.075±0.00 N/A 1.118±0.59 0.067±0.01 0.056±0.04 0.059±0.00 0.042±0.00 0.218±0.06 0.020±0.00 0.149±0.07 0.028±0.01 N/A

Loading