C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000M6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000035720-ENSG00000033178 CGP 9606 4:67558728-67701179
GeneTranscriptPositionBiotype
ENSG00000033178 (UBA6)
ubiquitin-like modifier activating enzyme 6 		ENST00000322244 (UBA6-001) 67612652-67701179 protein_coding
ENST00000420827 (UBA6-002) 67661663-67701153 protein_coding
ENST00000429659 (UBA6-003) 67662487-67701148 retained_intron
ENST00000505673 (UBA6-005) 67630454-67644774 protein_coding
ENST00000506571 (UBA6-004) 67678430-67701142 retained_intron
ENST00000514261 (UBA6-006) 67618855-67625155 nonsense_mediated_decay
ENSG00000035720 (STAP1)
signal transducing adaptor family member 1 		ENST00000265404 (STAP1-001) 67558728-67606898 protein_coding
ENST00000396225 (STAP1-002) 67558728-67607337 protein_coding
ENSG00000270257 (RP11-17P16.2)
 ENST00000604441 (RP11-17P16.2-001) 67638177-67638359 processed_pseudogene
ENSG00000279464 (RP11-17P16.1)
 ENST00000623308 (RP11-17P16.1-001) 67607856-67610313 TEC
CIL_0000M6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029254-ENSMUSG00000035898 CGP 10090 5:86071746-86172803
GeneTranscriptPositionBiotype
ENSMUSG00000029254 (Stap1)
signal transducing adaptor family member 1 		ENSMUST00000031171 (Stap1-001) 86071746-86103993 protein_coding
ENSMUST00000123393 (Stap1-002) 86071750-86097699 retained_intron
ENSMUST00000132546 (Stap1-004) 86071783-86086008 retained_intron
ENSMUST00000138076 (Stap1-005) 86086458-86094761 processed_transcript
ENSMUST00000151556 (Stap1-003) 86071774-86086012 retained_intron
ENSMUSG00000035898 (Uba6)
ubiquitin-like modifier activating enzyme 6 		ENSMUST00000039373 (Uba6-001) 86110720-86172803 protein_coding
ENSMUST00000113373 (Uba6-003) 86112342-86172511 protein_coding
ENSMUST00000147734 (Uba6-002) 86120841-86172739 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M6_0001ENSG00000033178ENST00000322244ENST00000420827ENST00000429659ENST00000505673ENST00000506571ENST00000514261ENSG00000035720ENST00000265404ENST00000396225ENSG00000270257ENST00000604441ENSG00000279464ENST00000623308CIL_0000M6_0002ENSMUSG00000029254ENSMUST00000031171ENSMUST00000123393ENSMUST00000132546ENSMUST00000138076ENSMUST00000151556ENSMUSG00000035898ENSMUST00000039373ENSMUST00000113373ENSMUST00000147734
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M6_0001ENSG00000033178ENST00000322244ENST00000420827ENST00000429659ENST00000505673ENSG00000035720ENST00000265404ENST00000396225ENSG00000270257ENST00000604441ENSG00000279464ENST00000623308CIL_0000M6_0002ENSMUSG00000029254ENSMUST00000031171ENSMUST00000123393ENSMUST00000132546ENSMUST00000138076ENSMUST00000151556ENSMUSG00000035898ENSMUST00000039373ENSMUST00000113373ENSMUST00000147734
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000033178 ENST00000322244 2.460±0.00 2.363±0.00 0.645±0.00 2.154±0.39 2.656±0.38 1.859±0.44 0.761±0.43 1.615±0.65 1.643±0.54 2.675±0.70 0.700±0.22 2.919±0.45 1.196±0.22 3.618±0.88
ENST00000420827 N/A N/A 1.404±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429659 N/A N/A 1.010±0.00 N/A 3.506±0.00 2.107±0.00 N/A N/A 1.488±0.00 2.524±0.00 N/A 2.904±0.00 N/A N/A
ENST00000505673 N/A N/A N/A N/A N/A N/A N/A N/A 6.019±0.00 N/A N/A N/A N/A N/A
ENST00000506571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000035720 ENST00000265404 0.041±0.00 6.808±0.00 N/A 0.024±0.00 0.100±0.00 0.261±0.00 0.006±0.00 3.516±0.00 N/A 0.607±0.00 N/A 0.092±0.03 0.116±0.03 0.769±0.24
ENST00000396225 0.067±0.00 N/A 0.736±0.00 0.055±0.00 0.302±0.00 0.277±0.19 0.055±0.00 2.350±0.00 0.105±0.09 0.373±0.00 N/A 0.123±0.05 0.153±0.00 0.193±0.00
ENSG00000270257 ENST00000604441 0.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.16 0.252±0.00
ENSG00000279464 ENST00000623308 0.055±0.00 0.334±0.00 0.033±0.00 0.085±0.00 0.075±0.03 0.041±0.02 0.031±0.01 0.067±0.00 0.043±0.01 0.172±0.00 0.041±0.00 0.108±0.06 0.056±0.02 0.076±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029254 ENSMUST00000031171 0.260±0.17 N/A 0.295±0.08 N/A 0.961±0.31 0.121±0.00 0.173±0.00 0.500±0.18 0.579±0.30 0.388±0.18 0.048±0.03 0.331±0.10 0.090±0.05 0.248±0.10
ENSMUST00000123393 0.063±0.01 0.127±0.01 N/A 0.025±0.00 0.639±0.13 0.076±0.00 0.035±0.01 0.061±0.00 N/A 0.133±0.01 N/A N/A 0.014±0.00 0.105±0.00
ENSMUST00000132546 N/A N/A N/A N/A 0.913±0.26 N/A N/A 0.165±0.00 N/A 0.308±0.11 0.162±0.00 N/A N/A 0.071±0.01
ENSMUST00000138076 0.163±0.00 N/A N/A N/A 1.505±0.00 N/A 0.175±0.07 0.333±0.21 0.251±0.18 0.412±0.05 N/A N/A 0.066±0.00 N/A
ENSMUST00000151556 0.117±0.04 N/A 0.075±0.00 N/A 1.118±0.59 0.067±0.01 0.056±0.04 0.059±0.00 0.042±0.00 0.218±0.06 0.020±0.00 0.149±0.07 0.028±0.01 N/A
ENSMUSG00000035898 ENSMUST00000039373 1.778±0.60 0.547±0.20 N/A 0.889±0.13 0.818±0.46 0.758±0.08 0.713±0.20 1.029±0.16 0.684±0.13 1.735±0.26 0.730±0.00 1.008±0.36 4.902±1.35 0.719±0.31
ENSMUST00000113373 0.536±0.23 0.260±0.13 N/A 0.778±0.32 0.774±0.39 0.400±0.11 0.312±0.06 0.244±0.06 0.233±0.19 0.764±0.00 0.369±0.00 0.483±0.14 7.031±2.59 1.023±0.30
ENSMUST00000147734 N/A 0.202±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.08 N/A N/A

Loading