C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell division cycle 7 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029283 Cdc7 10090 + 5:106964322-106984432 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031221 Cdc7-001 106964322-106984432 protein_coding
  ENSMUST00000076467 Cdc7-003 106964381-106984432 protein_coding
  ENSMUST00000117196 Cdc7-002 106964322-106984431 protein_coding
  ENSMUST00000118261 Cdc7-005 106964561-106984431 protein_coding
  ENSMUST00000123546 Cdc7-007 106975238-106979323 retained_intron
  ENSMUST00000129938 Cdc7-006 106965018-106983355 nonsense_mediated_decay
  ENSMUST00000140378 Cdc7-004 106964392-106984432 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031221ENSMUST00000076467ENSMUST00000117196ENSMUST00000118261ENSMUST00000123546ENSMUST00000129938ENSMUST00000140378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031221 1.146±0.00 1.110±0.08 1.391±0.00 4.365±0.59 1.360±0.00 N/A 0.294±0.00 0.280±0.06 6.347±3.07 0.221±0.00 0.132±0.03 1.831±0.44 4.228±3.37 1.711±0.29
ENSMUST00000076467 N/A N/A N/A 1.277±0.00 N/A 0.603±0.00 N/A N/A 0.045±0.00 0.265±0.00 N/A 0.889±0.28 1.411±0.35 0.572±0.00
ENSMUST00000117196 1.728±1.08 2.802±0.71 0.232±0.00 6.947±2.44 1.946±0.62 1.235±0.36 0.215±0.01 0.277±0.16 1.352±1.15 0.759±0.09 0.116±0.00 3.235±1.43 2.421±0.07 4.534±0.43
ENSMUST00000118261 0.495±0.07 N/A N/A N/A N/A 0.364±0.16 N/A 0.123±0.05 0.531±0.68 0.214±0.06 N/A 0.868±0.19 N/A 0.369±0.00
ENSMUST00000123546 1.900±0.89 N/A N/A 6.693±0.00 N/A N/A N/A 0.372±0.00 0.300±0.00 N/A 0.160±0.00 8.297±0.00 5.595±0.00 N/A
ENSMUST00000129938 N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A 0.032±0.00 N/A 0.037±0.00 1.910±0.52 N/A N/A
ENSMUST00000140378 0.518±0.07 N/A 0.542±0.38 8.837±2.84 N/A 0.377±0.00 0.090±0.02 0.139±0.05 2.910±2.22 0.264±0.00 0.219±0.11 1.068±0.39 1.567±0.78 1.768±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069J CIL_00069J_0002 CGP 5:106840192-106984432
CIL_0008DI CIL_0008DI_0002 VISTA 5:106921760-107524214
CIL_0008YV CIL_0008YV_0002 VISTA 5:106950899-107552442
CIL_00069I CIL_00069I_0002 CGP 5:106964322-107289629

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0008284 IEA positive regulation of cell proliferation
GO:0010571 IEA positive regulation of nuclear cell cycle DNA replication
GO:0010971 IEA positive regulation of G2/M transition of mitotic cell cycle
GO:0015630 IEA microtubule cytoskeleton
GO:0016301 IEA kinase activity
GO:0044770 IEA cell cycle phase transition
GO:0045171 IEA intercellular bridge
GO:0046872 IEA metal ion binding
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023584 cdc7 cell division cycle 7 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000097046 CDC7 cell division cycle 7 protein_coding Homo_sapiens

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