C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162669-ENSG00000097046 CGP 9606 1:91260766-91525764
GeneTranscriptPositionBiotype
ENSG00000097046 (CDC7)
cell division cycle 7 		ENST00000234626 (CDC7-001) 91500893-91525764 protein_coding
ENST00000426137 (CDC7-002) 91501138-91511823 protein_coding
ENST00000428239 (CDC7-201) 91501108-91525764 protein_coding
ENST00000486509 (CDC7-004) 91513127-91520280 processed_transcript
ENST00000497611 (CDC7-003) 91501160-91508405 processed_transcript
ENSG00000162669 (HFM1)
HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 		ENST00000370425 (HFM1-002) 91260766-91404869 protein_coding
ENST00000427444 (HFM1-006) 91385614-91404840 protein_coding
ENST00000430465 (HFM1-008) 91262186-91347449 protein_coding
ENST00000448819 (HFM1-005) 91380233-91404856 protein_coding
ENST00000455133 (HFM1-007) 91394173-91404735 protein_coding
ENST00000462405 (HFM1-009) 91260766-91352637 processed_transcript
ENST00000481900 (HFM1-001) 91377443-91404809 retained_intron
ENST00000488023 (HFM1-003) 91377759-91404808 retained_intron
ENST00000497520 (HFM1-004) 91316140-91328937 processed_transcript
ENSG00000206817 (Y_RNA)
Y RNA 		ENST00000384090 (Y_RNA.1-636) 91261625-91261724 misc_RNA
CIL_00069J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043410-ENSMUSG00000029283 CGP 10090 5:106840192-106984432
GeneTranscriptPositionBiotype
ENSMUSG00000029283 (Cdc7)
cell division cycle 7 (S. cerevisiae) 		ENSMUST00000031221 (Cdc7-001) 106964322-106984432 protein_coding
ENSMUST00000076467 (Cdc7-003) 106964381-106984432 protein_coding
ENSMUST00000117196 (Cdc7-002) 106964322-106984431 protein_coding
ENSMUST00000118261 (Cdc7-005) 106964561-106984431 protein_coding
ENSMUST00000123546 (Cdc7-007) 106975238-106979323 retained_intron
ENSMUST00000129938 (Cdc7-006) 106965018-106983355 nonsense_mediated_decay
ENSMUST00000140378 (Cdc7-004) 106964392-106984432 retained_intron
ENSMUSG00000043410 (Hfm1)
HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 		ENSMUST00000112690 (Hfm1-201) 106840197-106925890 protein_coding
ENSMUST00000117588 (Hfm1-001) 106840194-106926321 protein_coding
ENSMUST00000134292 (Hfm1-003) 106901887-106926258 retained_intron
ENSMUST00000148495 (Hfm1-004) 106840192-106895327 nonsense_mediated_decay
ENSMUST00000148686 (Hfm1-002) 106901887-106925890 nonsense_mediated_decay
ENSMUST00000155171 (Hfm1-005) 106841562-106889922 protein_coding
ENSMUSG00000067047 (Olfr719-ps)
olfactory receptor 719, pseudogene 		ENSMUST00000137795 (Olfr719-ps-001) 106906738-106906980 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069J_0001ENSG00000097046ENST00000234626ENST00000426137ENST00000428239ENST00000486509ENST00000497611ENSG00000162669ENST00000370425ENST00000427444ENST00000430465ENST00000448819ENST00000455133ENST00000462405ENST00000481900ENST00000488023ENST00000497520ENSG00000206817ENST00000384090CIL_00069J_0002ENSMUSG00000029283ENSMUST00000031221ENSMUST00000076467ENSMUST00000117196ENSMUST00000118261ENSMUST00000123546ENSMUST00000129938ENSMUST00000140378ENSMUSG00000043410ENSMUST00000112690ENSMUST00000117588ENSMUST00000134292ENSMUST00000148495ENSMUST00000148686ENSMUST00000155171ENSMUSG00000067047ENSMUST00000137795
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069J_0001ENSG00000097046ENST00000234626ENST00000426137ENST00000428239ENST00000486509ENST00000497611ENSG00000162669ENST00000370425ENST00000427444ENST00000430465ENST00000448819ENST00000455133ENST00000462405ENST00000481900ENSG00000206817ENST00000384090CIL_00069J_0002ENSMUSG00000029283ENSMUST00000031221ENSMUST00000076467ENSMUST00000117196ENSMUST00000118261ENSMUST00000123546ENSMUST00000129938ENSMUST00000140378ENSMUSG00000043410ENSMUST00000112690ENSMUST00000117588ENSMUST00000134292ENSMUST00000148495ENSMUST00000148686ENSMUST00000155171ENSMUSG00000067047ENSMUST00000137795
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000097046 ENST00000234626 0.070±0.00 N/A 0.022±0.00 0.676±0.00 N/A 0.613±0.00 0.034±0.00 0.923±0.00 0.104±0.01 0.663±0.00 N/A 1.438±0.28 1.368±0.47 3.299±1.63
ENST00000426137 N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A 1.764±0.00 N/A N/A N/A 7.010±0.00
ENST00000428239 N/A 0.555±0.00 N/A 0.486±0.00 N/A N/A N/A N/A N/A 0.537±0.00 N/A N/A N/A 1.198±0.00
ENST00000486509 N/A N/A N/A N/A 0.638±0.00 N/A 0.081±0.00 N/A N/A N/A 0.075±0.00 N/A N/A N/A
ENST00000497611 N/A N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000162669 ENST00000370425 N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.10 0.038±0.01 1.504±0.00
ENST00000427444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.205±0.00 N/A N/A
ENST00000430465 0.055±0.00 0.211±0.00 0.170±0.00 0.039±0.00 0.070±0.00 0.026±0.00 N/A N/A N/A 0.019±0.00 0.018±0.00 0.298±0.18 0.013±0.00 2.778±1.20
ENST00000448819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A
ENST00000455133 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462405 0.026±0.00 N/A N/A 0.036±0.00 0.015±0.00 N/A N/A 0.250±0.00 N/A N/A 0.019±0.00 0.296±0.24 0.012±0.00 N/A
ENST00000481900 N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206817 ENST00000384090 N/A N/A N/A N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029283 ENSMUST00000031221 1.146±0.00 1.110±0.08 1.391±0.00 4.365±0.59 1.360±0.00 N/A 0.294±0.00 0.280±0.06 6.347±3.07 0.221±0.00 0.132±0.03 1.831±0.44 4.228±3.37 1.711±0.29
ENSMUST00000076467 N/A N/A N/A 1.277±0.00 N/A 0.603±0.00 N/A N/A 0.045±0.00 0.265±0.00 N/A 0.889±0.28 1.411±0.35 0.572±0.00
ENSMUST00000117196 1.728±1.08 2.802±0.71 0.232±0.00 6.947±2.44 1.946±0.62 1.235±0.36 0.215±0.01 0.277±0.16 1.352±1.15 0.759±0.09 0.116±0.00 3.235±1.43 2.421±0.07 4.534±0.43
ENSMUST00000118261 0.495±0.07 N/A N/A N/A N/A 0.364±0.16 N/A 0.123±0.05 0.531±0.68 0.214±0.06 N/A 0.868±0.19 N/A 0.369±0.00
ENSMUST00000123546 1.900±0.89 N/A N/A 6.693±0.00 N/A N/A N/A 0.372±0.00 0.300±0.00 N/A 0.160±0.00 8.297±0.00 5.595±0.00 N/A
ENSMUST00000129938 N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A 0.032±0.00 N/A 0.037±0.00 1.910±0.52 N/A N/A
ENSMUST00000140378 0.518±0.07 N/A 0.542±0.38 8.837±2.84 N/A 0.377±0.00 0.090±0.02 0.139±0.05 2.910±2.22 0.264±0.00 0.219±0.11 1.068±0.39 1.567±0.78 1.768±0.00
ENSMUSG00000043410 ENSMUST00000112690 N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.040±0.00 N/A 1.070±0.46
ENSMUST00000117588 0.009±0.00 N/A 0.006±0.00 1.305±1.27 N/A N/A 0.009±0.00 N/A 0.009±0.00 N/A N/A 0.018±0.00 0.007±0.00 1.472±0.99
ENSMUST00000134292 N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.038±0.00 N/A N/A N/A N/A
ENSMUST00000148495 0.086±0.00 N/A 0.005±0.00 0.040±0.00 N/A N/A N/A N/A 0.014±0.01 0.036±0.00 0.006±0.00 0.014±0.00 N/A N/A
ENSMUST00000148686 N/A N/A 0.015±0.01 N/A N/A N/A N/A N/A 0.028±0.02 N/A N/A 0.028±0.01 0.015±0.00 N/A
ENSMUST00000155171 N/A N/A 0.004±0.00 0.186±0.00 N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.237±0.00 0.030±0.02 1.745±0.00
ENSMUSG00000067047 ENSMUST00000137795 N/A N/A N/A 0.680±0.32 N/A N/A N/A N/A N/A N/A N/A 1.040±0.00 N/A 2.615±0.00

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