C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000097046-ENSG00000069702 CGP 9606 1:91500893-91906335
GeneTranscriptPositionBiotype
ENSG00000069702 (TGFBR3)
transforming growth factor, beta receptor III 		ENST00000212355 (TGFBR3-201) 91680345-91886279 protein_coding
ENST00000370399 (TGFBR3-001) 91682426-91906335 protein_coding
ENST00000417833 (TGFBR3-009) 91797427-91886122 protein_coding
ENST00000465892 (TGFBR3-002) 91683729-91886109 protein_coding
ENST00000468996 (TGFBR3-004) 91727777-91766432 processed_transcript
ENST00000470600 (TGFBR3-005) 91695490-91712363 retained_intron
ENST00000525962 (TGFBR3-006) 91682430-91861593 protein_coding
ENST00000529608 (TGFBR3-010) 91719893-91727918 retained_intron
ENST00000532540 (TGFBR3-008) 91682647-91885932 nonsense_mediated_decay
ENST00000533089 (TGFBR3-007) 91680343-91862046 nonsense_mediated_decay
ENST00000533370 (TGFBR3-003) 91863839-91886151 processed_transcript
ENSG00000097046 (CDC7)
cell division cycle 7 		ENST00000234626 (CDC7-001) 91500893-91525764 protein_coding
ENST00000426137 (CDC7-002) 91501138-91511823 protein_coding
ENST00000428239 (CDC7-201) 91501108-91525764 protein_coding
ENST00000486509 (CDC7-004) 91513127-91520280 processed_transcript
ENST00000497611 (CDC7-003) 91501160-91508405 processed_transcript
ENSG00000203914 (HSP90B3P)
heat shock protein 90kDa beta (Grp94), member 3, pseudogene 		ENST00000415545 (HSP90B3P-001) 91642516-91644082 processed_pseudogene
ENSG00000239794 (RN7SL653P)
RNA, 7SL, cytoplasmic 653, pseudogene 		ENST00000494134 (RN7SL653P-201) 91829774-91830066 misc_RNA
ENSG00000241318 (RP11-47K11.2)
 ENST00000444540 (RP11-47K11.2-001) 91534666-91535593 processed_pseudogene
CIL_00069I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029283-ENSMUSG00000029287 CGP 10090 5:106964322-107289629
GeneTranscriptPositionBiotype
ENSMUSG00000029283 (Cdc7)
cell division cycle 7 (S. cerevisiae) 		ENSMUST00000031221 (Cdc7-001) 106964322-106984432 protein_coding
ENSMUST00000076467 (Cdc7-003) 106964381-106984432 protein_coding
ENSMUST00000117196 (Cdc7-002) 106964322-106984431 protein_coding
ENSMUST00000118261 (Cdc7-005) 106964561-106984431 protein_coding
ENSMUST00000123546 (Cdc7-007) 106975238-106979323 retained_intron
ENSMUST00000129938 (Cdc7-006) 106965018-106983355 nonsense_mediated_decay
ENSMUST00000140378 (Cdc7-004) 106964392-106984432 retained_intron
ENSMUSG00000029287 (Tgfbr3)
transforming growth factor, beta receptor III 		ENSMUST00000031224 (Tgfbr3-001) 107106570-107289629 protein_coding
ENSMUST00000136882 (Tgfbr3-004) 107118197-107132923 protein_coding
ENSMUST00000138469 (Tgfbr3-003) 107109281-107192367 processed_transcript
ENSMUST00000146591 (Tgfbr3-002) 107147980-107289595 retained_intron
ENSMUSG00000084218 (Gm8145)
predicted gene 8145 		ENSMUST00000118220 (Gm8145-001) 107241623-107242367 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069I_0001ENSG00000069702ENST00000212355ENST00000370399ENST00000417833ENST00000465892ENST00000468996ENST00000470600ENST00000525962ENST00000529608ENST00000532540ENST00000533089ENST00000533370ENSG00000097046ENST00000234626ENST00000426137ENST00000428239ENST00000486509ENST00000497611ENSG00000203914ENST00000415545ENSG00000239794ENST00000494134ENSG00000241318ENST00000444540CIL_00069I_0002ENSMUSG00000029283ENSMUST00000031221ENSMUST00000076467ENSMUST00000117196ENSMUST00000118261ENSMUST00000123546ENSMUST00000129938ENSMUST00000140378ENSMUSG00000029287ENSMUST00000031224ENSMUST00000136882ENSMUST00000138469ENSMUST00000146591ENSMUSG00000084218ENSMUST00000118220
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069I_0001ENSG00000069702ENST00000212355ENST00000465892ENST00000532540ENSG00000097046ENST00000234626ENST00000426137ENST00000428239ENST00000486509ENST00000497611ENSG00000203914ENST00000415545ENSG00000239794ENST00000494134ENSG00000241318ENST00000444540CIL_00069I_0002ENSMUSG00000029283ENSMUST00000031221ENSMUST00000076467ENSMUST00000117196ENSMUST00000118261ENSMUST00000123546ENSMUST00000129938ENSMUST00000140378ENSMUSG00000029287ENSMUST00000031224ENSMUST00000138469ENSMUST00000146591ENSMUSG00000084218ENSMUST00000118220
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000069702 ENST00000212355 41.466±0.00 5.845±0.00 N/A 0.838±0.07 9.879±2.53 9.559±7.69 3.820±1.78 3.289±1.46 4.815±3.67 16.557±9.15 3.066±0.00 16.003±20.85 7.588±0.07 3.345±1.97
ENST00000370399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465892 N/A N/A 7.189±0.00 0.611±0.00 4.172±0.00 3.487±0.00 1.297±0.00 1.345±0.00 16.486±0.00 7.240±0.00 2.149±0.00 7.283±0.00 N/A N/A
ENST00000468996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532540 N/A N/A N/A N/A N/A 2.005±0.00 N/A N/A N/A N/A 1.044±0.00 0.706±0.00 N/A N/A
ENST00000533089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000097046 ENST00000234626 0.070±0.00 N/A 0.022±0.00 0.676±0.00 N/A 0.613±0.00 0.034±0.00 0.923±0.00 0.104±0.01 0.663±0.00 N/A 1.438±0.28 1.368±0.47 3.299±1.63
ENST00000426137 N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A 1.764±0.00 N/A N/A N/A 7.010±0.00
ENST00000428239 N/A 0.555±0.00 N/A 0.486±0.00 N/A N/A N/A N/A N/A 0.537±0.00 N/A N/A N/A 1.198±0.00
ENST00000486509 N/A N/A N/A N/A 0.638±0.00 N/A 0.081±0.00 N/A N/A N/A 0.075±0.00 N/A N/A N/A
ENST00000497611 N/A N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000203914 ENST00000415545 0.026±0.00 0.027±0.00 N/A 0.019±0.00 0.006±0.00 0.024±0.00 0.006±0.00 0.033±0.00 0.047±0.00 0.073±0.00 N/A 0.012±0.01 0.014±0.01 0.012±0.01
ENSG00000239794 ENST00000494134 0.185±0.00 N/A 0.363±0.00 N/A 1.003±0.87 N/A 1.060±0.94 N/A 0.985±0.86 3.421±0.00 N/A 2.486±0.00 N/A N/A
ENSG00000241318 ENST00000444540 0.029±0.00 N/A N/A 0.016±0.00 0.059±0.00 0.156±0.04 N/A N/A N/A 0.053±0.00 N/A 0.072±0.04 0.059±0.00 0.145±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029283 ENSMUST00000031221 1.146±0.00 1.110±0.08 1.391±0.00 4.365±0.59 1.360±0.00 N/A 0.294±0.00 0.280±0.06 6.347±3.07 0.221±0.00 0.132±0.03 1.831±0.44 4.228±3.37 1.711±0.29
ENSMUST00000076467 N/A N/A N/A 1.277±0.00 N/A 0.603±0.00 N/A N/A 0.045±0.00 0.265±0.00 N/A 0.889±0.28 1.411±0.35 0.572±0.00
ENSMUST00000117196 1.728±1.08 2.802±0.71 0.232±0.00 6.947±2.44 1.946±0.62 1.235±0.36 0.215±0.01 0.277±0.16 1.352±1.15 0.759±0.09 0.116±0.00 3.235±1.43 2.421±0.07 4.534±0.43
ENSMUST00000118261 0.495±0.07 N/A N/A N/A N/A 0.364±0.16 N/A 0.123±0.05 0.531±0.68 0.214±0.06 N/A 0.868±0.19 N/A 0.369±0.00
ENSMUST00000123546 1.900±0.89 N/A N/A 6.693±0.00 N/A N/A N/A 0.372±0.00 0.300±0.00 N/A 0.160±0.00 8.297±0.00 5.595±0.00 N/A
ENSMUST00000129938 N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A 0.032±0.00 N/A 0.037±0.00 1.910±0.52 N/A N/A
ENSMUST00000140378 0.518±0.07 N/A 0.542±0.38 8.837±2.84 N/A 0.377±0.00 0.090±0.02 0.139±0.05 2.910±2.22 0.264±0.00 0.219±0.11 1.068±0.39 1.567±0.78 1.768±0.00
ENSMUSG00000029287 ENSMUST00000031224 26.401±2.02 34.605±3.97 23.072±2.43 1.267±0.34 18.926±6.28 4.969±1.39 10.926±0.53 11.938±0.31 2.612±1.08 22.879±0.41 3.066±0.92 18.546±5.31 21.008±5.67 1.736±1.09
ENSMUST00000136882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138469 N/A 20.758±4.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.671±0.04
ENSMUST00000146591 N/A 68.272±12.93 N/A N/A 21.518±0.97 5.410±1.19 N/A N/A 0.741±0.00 12.958±1.43 N/A 17.972±3.33 N/A 1.843±0.00
ENSMUSG00000084218 ENSMUST00000118220 N/A 0.298±0.09 N/A N/A 0.847±0.32 0.144±0.00 0.182±0.07 0.180±0.06 0.092±0.07 0.522±0.07 0.055±0.00 0.887±0.50 N/A 0.128±0.00

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