C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CDK2 (cyclin-dependent kinase 2)-associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029394 Cdk2ap1 10090 - 5:124345417-124354671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031341 Cdk2ap1-001 124345417-124354671 protein_coding
  ENSMUST00000111472 Cdk2ap1-002 124345763-124352233 protein_coding
  ENSMUST00000111473 Cdk2ap1-004 124345744-124350254 protein_coding
  ENSMUST00000111474 Cdk2ap1-003 124345605-124351654 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031341ENSMUST00000111472ENSMUST00000111473ENSMUST00000111474
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031341 16.717±4.15 13.906±5.49 16.032±3.12 54.078±26.29 13.987±1.74 12.499±1.09 12.344±0.98 9.033±0.90 15.910±14.99 9.352±1.10 24.841±2.03 17.915±3.26 13.171±4.70 3.776±1.28
ENSMUST00000111472 N/A N/A 6.075±0.00 N/A N/A N/A N/A N/A 22.019±9.68 N/A N/A N/A 8.817±2.02 2.035±0.00
ENSMUST00000111473 N/A N/A 5.417±0.00 15.423±0.00 6.648±0.00 N/A 5.861±0.00 N/A 4.601±0.44 N/A N/A 4.382±0.00 N/A N/A
ENSMUST00000111474 N/A 14.630±1.76 N/A 11.536±4.12 5.421±1.52 9.073±0.67 2.827±0.56 2.821±0.73 1.695±0.62 4.931±1.58 N/A 11.415±4.74 N/A 1.797±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0003J7 CIL_0003J7_0002 CGP 5:124328089-124354671
CIL_0003J6 CIL_0003J6_0002 CGP 5:124345417-124425914

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007049 IEA cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000111328 CDK2AP1 cyclin-dependent kinase 2 associated protein 1 protein_coding Homo_sapiens

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