C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin-dependent kinase 2 associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111328 CDK2AP1 9606 - 12:123260971-123272334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261692 CDK2AP1-001 123260981-123272140 protein_coding
  ENST00000535796 CDK2AP1-006 123265193-123268284 protein_coding
  ENST00000535979 CDK2AP1-002 123261003-123271141 protein_coding
  ENST00000538446 CDK2AP1-003 123261003-123269239 protein_coding
  ENST00000542174 CDK2AP1-005 123261012-123268077 protein_coding
  ENST00000544658 CDK2AP1-004 123261276-123272334 protein_coding
  ENST00000618072 CDK2AP1-201 123260971-123268254 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261692ENST00000535979ENST00000538446ENST00000544658ENST00000618072
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261692 25.214±0.00 27.366±0.00 5.235±0.00 23.782±6.98 20.911±8.33 16.198±13.18 12.517±9.75 21.072±0.00 7.241±3.53 14.763±11.27 5.230±0.33 30.244±21.88 13.492±6.14 24.981±9.86
ENST00000535979 11.538±0.00 24.909±0.00 N/A 26.748±0.00 14.822±0.00 17.346±0.00 15.436±0.00 12.405±0.00 13.178±0.00 14.240±0.00 12.516±0.00 15.567±0.00 4.344±0.00 20.468±6.61
ENST00000538446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.542±0.00 N/A N/A
ENST00000544658 9.535±0.00 N/A N/A 20.558±0.00 12.579±0.00 9.233±0.00 N/A 22.710±0.00 N/A N/A N/A 74.405±0.00 37.187±0.00 27.639±13.99
ENST00000618072 N/A N/A N/A 22.170±0.00 N/A 6.890±0.00 1.222±0.00 7.836±0.00 10.246±0.00 6.983±0.00 3.897±0.00 15.048±9.62 24.232±4.90 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0003J7 CIL_0003J7_0001 CGP 12:123232916-123272334
CIL_0003J6 CIL_0003J6_0001 CGP 12:123260971-123364843

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001934 IDA positive regulation of protein phosphorylation
GO:0005634 IDA nucleus
GO:0006261 NAS DNA-dependent DNA replication
GO:0007049 IEA cell cycle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070182 IPI DNA polymerase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000029394 Cdk2ap1 CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein_coding Mus_musculus
ENSMUSG00000078154 Gm12184 predicted gene 12184 protein_coding Mus_musculus

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