C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003J6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111328-ENSG00000139697 CGP 9606 12:123260971-123364843
GeneTranscriptPositionBiotype
ENSG00000111328 (CDK2AP1)
cyclin-dependent kinase 2 associated protein 1
ENST00000261692 (CDK2AP1-001) 123260981-123272140 protein_coding
ENST00000535796 (CDK2AP1-006) 123265193-123268284 protein_coding
ENST00000535979 (CDK2AP1-002) 123261003-123271141 protein_coding
ENST00000538446 (CDK2AP1-003) 123261003-123269239 protein_coding
ENST00000542174 (CDK2AP1-005) 123261012-123268077 protein_coding
ENST00000544658 (CDK2AP1-004) 123261276-123272334 protein_coding
ENST00000618072 (CDK2AP1-201) 123260971-123268254 protein_coding
ENSG00000139697 (SBNO1)
strawberry notch homolog 1 (Drosophila)
ENST00000267176 (SBNO1-001) 123289109-123364843 protein_coding
ENST00000420886 (SBNO1-201) 123289109-123350441 protein_coding
ENST00000602398 (SBNO1-002) 123295905-123364828 protein_coding
ENSG00000269980 (RP11-282O18.7)
ENST00000602352 (RP11-282O18.7-001) 123262060-123262402 antisense
CIL_0003J6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029394-ENSMUSG00000038095 CGP 10090 5:124345417-124425914
GeneTranscriptPositionBiotype
ENSMUSG00000029394 (Cdk2ap1)
CDK2 (cyclin-dependent kinase 2)-associated protein 1
ENSMUST00000031341 (Cdk2ap1-001) 124345417-124354671 protein_coding
ENSMUST00000111472 (Cdk2ap1-002) 124345763-124352233 protein_coding
ENSMUST00000111473 (Cdk2ap1-004) 124345744-124350254 protein_coding
ENSMUST00000111474 (Cdk2ap1-003) 124345605-124351654 protein_coding
ENSMUSG00000038095 (Sbno1)
sno, strawberry notch homolog 1 (Drosophila)
ENSMUST00000065263 (Sbno1-201) 124368702-124425914 protein_coding
ENSMUST00000168651 (Sbno1-202) 124374013-124425572 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003J6_0001ENSG00000111328ENST00000261692ENST00000535796ENST00000535979ENST00000538446ENST00000542174ENST00000544658ENST00000618072ENSG00000139697ENST00000267176ENST00000420886ENST00000602398ENSG00000269980ENST00000602352CIL_0003J6_0002ENSMUSG00000029394ENSMUST00000031341ENSMUST00000111472ENSMUST00000111473ENSMUST00000111474ENSMUSG00000038095ENSMUST00000065263ENSMUST00000168651
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003J6_0001ENSG00000111328ENST00000261692ENST00000535979ENST00000538446ENST00000544658ENST00000618072ENSG00000139697ENST00000267176ENST00000420886ENST00000602398ENSG00000269980ENST00000602352CIL_0003J6_0002ENSMUSG00000029394ENSMUST00000031341ENSMUST00000111472ENSMUST00000111473ENSMUST00000111474ENSMUSG00000038095ENSMUST00000065263ENSMUST00000168651
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111328 ENST00000261692 25.214±0.00 27.366±0.00 5.235±0.00 23.782±6.98 20.911±8.33 16.198±13.18 12.517±9.75 21.072±0.00 7.241±3.53 14.763±11.27 5.230±0.33 30.244±21.88 13.492±6.14 24.981±9.86
ENST00000535796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535979 11.538±0.00 24.909±0.00 N/A 26.748±0.00 14.822±0.00 17.346±0.00 15.436±0.00 12.405±0.00 13.178±0.00 14.240±0.00 12.516±0.00 15.567±0.00 4.344±0.00 20.468±6.61
ENST00000538446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.542±0.00 N/A N/A
ENST00000542174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544658 9.535±0.00 N/A N/A 20.558±0.00 12.579±0.00 9.233±0.00 N/A 22.710±0.00 N/A N/A N/A 74.405±0.00 37.187±0.00 27.639±13.99
ENST00000618072 N/A N/A N/A 22.170±0.00 N/A 6.890±0.00 1.222±0.00 7.836±0.00 10.246±0.00 6.983±0.00 3.897±0.00 15.048±9.62 24.232±4.90 N/A
ENSG00000139697 ENST00000267176 2.159±0.00 3.610±0.00 N/A 2.331±0.61 1.029±0.00 2.815±0.00 0.909±0.12 3.965±0.00 2.405±0.49 1.006±0.00 3.284±0.00 3.400±1.02 1.355±0.52 13.629±0.20
ENST00000420886 N/A N/A N/A 1.256±0.23 1.666±0.00 N/A N/A 1.464±0.00 N/A 2.009±0.00 N/A 1.581±0.00 0.636±0.00 N/A
ENST00000602398 2.100±0.00 N/A 3.629±0.00 4.370±1.76 6.816±0.00 7.870±0.00 2.733±0.17 4.431±0.00 6.282±0.00 6.386±0.00 2.729±1.14 6.281±3.58 3.028±2.51 36.077±20.65
ENSG00000269980 ENST00000602352 0.220±0.00 0.387±0.00 N/A N/A 0.057±0.00 N/A N/A 0.055±0.00 N/A N/A N/A 0.852±0.48 N/A 0.566±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029394 ENSMUST00000031341 16.717±4.15 13.906±5.49 16.032±3.12 54.078±26.29 13.987±1.74 12.499±1.09 12.344±0.98 9.033±0.90 15.910±14.99 9.352±1.10 24.841±2.03 17.915±3.26 13.171±4.70 3.776±1.28
ENSMUST00000111472 N/A N/A 6.075±0.00 N/A N/A N/A N/A N/A 22.019±9.68 N/A N/A N/A 8.817±2.02 2.035±0.00
ENSMUST00000111473 N/A N/A 5.417±0.00 15.423±0.00 6.648±0.00 N/A 5.861±0.00 N/A 4.601±0.44 N/A N/A 4.382±0.00 N/A N/A
ENSMUST00000111474 N/A 14.630±1.76 N/A 11.536±4.12 5.421±1.52 9.073±0.67 2.827±0.56 2.821±0.73 1.695±0.62 4.931±1.58 N/A 11.415±4.74 N/A 1.797±0.35
ENSMUSG00000038095 ENSMUST00000065263 0.605±0.00 2.569±0.00 3.204±1.40 9.534±4.07 1.925±0.72 3.069±0.00 0.700±0.16 1.969±0.82 2.215±2.26 N/A 1.115±0.56 2.908±1.66 2.242±0.86 7.444±3.72
ENSMUST00000168651 4.845±0.00 N/A 3.585±0.00 6.203±4.01 N/A N/A 2.643±0.00 N/A 2.507±0.02 3.198±0.00 2.068±0.58 5.751±4.73 11.676±6.07 16.851±16.23

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