C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 6 interacting protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029404 Arl6ip4 10090 + 5:124116089-124118196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031351 Arl6ip4-001 124116099-124118196 protein_coding
  ENSMUST00000122394 Arl6ip4-003 124116122-124118096 protein_coding
  ENSMUST00000145667 Arl6ip4-004 124116679-124118034 protein_coding
  ENSMUST00000149835 Arl6ip4-002 124116089-124117042 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031351ENSMUST00000122394ENSMUST00000145667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031351 13.787±1.19 12.758±3.65 28.679±0.16 22.358±5.44 12.926±2.47 15.050±2.51 8.974±1.51 15.725±1.50 27.566±17.36 15.899±0.60 21.548±1.67 15.343±5.09 23.968±10.13 17.426±2.59
ENSMUST00000122394 N/A N/A N/A 16.185±0.00 N/A N/A N/A N/A N/A N/A N/A 22.064±0.00 18.002±10.53 5.020±0.00
ENSMUST00000145667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.566±0.00 N/A 8.941±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0002P6 CIL_0002P6_0002 CGP 5:124112297-124118196
CIL_0002P7 CIL_0002P7_0002 CGP 5:124116089-124249760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051971 arl6ip4 ADP-ribosylation-like factor 6 interacting protein 4 protein_coding Danio_rerio
ENSG00000182196 ARL6IP4 ADP-ribosylation factor-like 6 interacting protein 4 protein_coding Homo_sapiens

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