C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: E1A binding protein p400
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029505 Ep400 10090 - 5:110664373-110770717 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041558 Ep400-002 110664373-110770527 protein_coding
  ENSMUST00000112433 Ep400-003 110738070-110770155 protein_coding
  ENSMUST00000112435 Ep400-201 110664373-110770717 protein_coding
  ENSMUST00000112436 Ep400-001 110664378-110770717 protein_coding
  ENSMUST00000122901 Ep400-009 110667534-110668807 retained_intron
  ENSMUST00000125325 Ep400-006 110697341-110707943 protein_coding
  ENSMUST00000129884 Ep400-008 110687874-110692167 retained_intron
  ENSMUST00000141986 Ep400-007 110695962-110699133 retained_intron
  ENSMUST00000144581 Ep400-010 110667370-110668188 processed_transcript
  ENSMUST00000146458 Ep400-004 110737672-110770585 protein_coding
  ENSMUST00000146652 Ep400-005 110756432-110770717 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041558ENSMUST00000112433ENSMUST00000112435ENSMUST00000112436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041558 N/A 4.609±1.13 N/A 3.786±0.87 2.258±0.00 2.716±0.00 0.792±0.17 1.628±0.00 1.371±0.56 N/A 0.548±0.14 6.565±3.48 2.109±0.52 14.198±3.50
ENSMUST00000112433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.774±19.74
ENSMUST00000112435 1.196±0.45 3.133±0.82 N/A 4.448±2.64 1.117±0.00 N/A 0.560±0.13 1.450±0.45 1.197±0.83 2.997±0.73 N/A 3.856±1.71 1.144±0.00 8.004±0.60
ENSMUST00000112436 2.393±1.33 4.441±2.03 2.137±0.68 2.762±0.84 3.857±1.85 2.814±0.39 1.036±0.23 1.967±0.55 2.017±0.91 3.688±0.00 0.698±0.19 3.267±1.31 3.836±1.71 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NO CIL_0008NO_0002 VISTA 5:110598210-111198771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000812 ISS Swr1 complex
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0016607 IDA nuclear speck
GO:0035267 ISS NuA4 histone acetyltransferase complex
GO:0043967 ISS histone H4 acetylation
GO:0043968 ISS histone H2A acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074040 EP400 E1A binding protein p400 protein_coding Danio_rerio
ENSG00000183495 EP400 E1A binding protein p400 protein_coding Homo_sapiens

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