C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: E1A binding protein p400
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183495 EP400 9606 + 12:131949920-132081102 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330386 EP400-004 132062595-132080457 protein_coding
  ENST00000332482 EP400-003 131949963-131990675 protein_coding
  ENST00000333577 EP400-002 131949971-131995012 protein_coding
  ENST00000389561 EP400-201 131949920-132080466 protein_coding
  ENST00000389562 EP400-001 131960585-132081102 protein_coding
  ENST00000611118 EP400-007 132075701-132078910 retained_intron
  ENST00000611739 EP400-006 132064908-132078910 retained_intron
  ENST00000611841 EP400-008 132028946-132051016 retained_intron
  ENST00000616136 EP400-005 132068099-132078913 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330386ENST00000389561ENST00000389562ENST00000611841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330386 N/A 4.502±0.00 N/A 2.027±1.23 2.327±0.00 2.373±0.00 1.025±0.00 4.189±0.00 1.924±0.00 1.967±0.00 1.774±0.00 5.222±2.92 2.459±1.39 8.084±2.40
ENST00000389561 4.813±0.00 3.368±0.00 0.550±0.00 1.242±0.62 2.840±0.24 1.324±0.58 1.975±0.00 1.905±0.00 0.859±0.00 1.176±0.68 4.364±0.00 4.348±2.35 2.242±0.95 4.927±0.00
ENST00000389562 N/A N/A N/A N/A N/A 0.298±0.00 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000611841 N/A N/A N/A N/A N/A 1.696±0.00 0.582±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000812 IDA Swr1 complex
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0016607 ISS nuclear speck
GO:0035267 IDA NuA4 histone acetyltransferase complex
GO:0043967 IDA histone H4 acetylation
GO:0043968 IDA histone H2A acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074040 EP400 E1A binding protein p400 protein_coding Danio_rerio
ENSMUSG00000029505 Ep400 E1A binding protein p400 protein_coding Mus_musculus

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