C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029560 Snx8 10090 - 5:140340304-140389251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031539 Snx8-201 140340304-140389251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031539 10.174±0.59 6.439±0.79 8.189±0.61 7.945±2.56 10.592±2.85 4.421±0.17 3.543±0.76 30.337±5.23 5.756±1.20 8.923±0.51 3.038±0.74 10.325±2.50 14.956±8.17 1.697±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZO CIL_0000ZO_0002 CGP 5:140331860-140389251
CIL_0000ZL CIL_0000ZL_0002 CGP 5:140340304-140443358

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005768 IBA endosome
GO:0006886 ISS intracellular protein transport
GO:0030904 ISS retromer complex
GO:0031901 ISS early endosome membrane
GO:0034498 ISS early endosome to Golgi transport
GO:0035091 ISS phosphatidylinositol binding
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074842 snx8a sorting nexin 8a protein_coding Danio_rerio
ENSDARG00000077708 snx8b sorting nexin 8b protein_coding Danio_rerio
ENSDARG00000078057 snx8b sorting nexin 8b protein_coding Danio_rerio
ENSG00000106266 SNX8 sorting nexin 8 protein_coding Homo_sapiens

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