C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgi coiled coil 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029708 Gcc1 10090 - 6:28416091-28428390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064377 Gcc1-001 28417829-28428390 protein_coding
  ENSMUST00000090511 Gcc1-002 28416091-28421724 protein_coding
  ENSMUST00000165455 Gcc1-004 28419662-28420858 protein_coding
  ENSMUST00000170767 Gcc1-003 28421280-28424153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064377ENSMUST00000090511ENSMUST00000170767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064377 0.868±0.09 N/A N/A N/A N/A N/A 0.413±0.08 N/A N/A N/A N/A N/A 2.184±0.56 6.725±0.00
ENSMUST00000090511 3.090±1.04 5.005±0.35 4.302±0.04 2.671±0.32 4.283±1.24 6.053±0.35 1.459±0.30 2.931±0.44 2.826±0.26 5.789±0.29 1.614±0.20 5.735±1.04 3.554±0.84 3.000±0.00
ENSMUST00000170767 N/A 5.301±0.41 N/A N/A N/A 9.004±0.00 N/A N/A N/A N/A N/A 11.323±1.28 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LN CIL_0008LN_0002 VISTA 6:28095025-28698247
CIL_0001OK CIL_0001OK_0002 CGP 6:28239931-28428390
CIL_0001OJ CIL_0001OJ_0002 CGP 6:28416091-28428390

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045541 gcc1 GRIP and coiled-coil domain containing 1 protein_coding Danio_rerio
ENSG00000179562 GCC1 GRIP and coiled-coil domain containing 1 protein_coding Homo_sapiens

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