C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TSC22 domain family, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029723 Tsc22d4 10090 + 5:137745730-137768450 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031738 Tsc22d4-004 137761710-137768392 protein_coding
  ENSMUST00000100539 Tsc22d4-002 137745996-137761408 protein_coding
  ENSMUST00000100540 Tsc22d4-001 137745730-137768450 protein_coding
  ENSMUST00000110983 Tsc22d4-007 137761699-137768392 protein_coding
  ENSMUST00000110985 Tsc22d4-006 137758185-137759432 protein_coding
  ENSMUST00000129349 Tsc22d4-003 137745959-137752728 retained_intron
  ENSMUST00000129399 Tsc22d4-009 137751182-137758898 retained_intron
  ENSMUST00000138698 Tsc22d4-008 137767690-137768282 processed_transcript
  ENSMUST00000141733 Tsc22d4-005 137758145-137759548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031738ENSMUST00000100539ENSMUST00000100540ENSMUST00000110985ENSMUST00000129349ENSMUST00000141733
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 180.907±76.97
ENSMUST00000100539 7.827±2.17 6.703±0.53 7.265±1.75 2.742±0.26 8.444±4.69 17.019±2.04 19.740±4.19 8.088±0.95 3.348±2.32 9.319±0.62 3.263±1.00 10.821±3.13 3.625±1.21 N/A
ENSMUST00000100540 N/A 3.434±0.50 4.305±0.00 1.581±0.00 3.947±0.00 N/A 6.159±0.00 2.477±0.01 1.697±1.36 2.741±0.27 4.064±1.36 5.125±1.76 4.925±0.00 2.377±0.00
ENSMUST00000110985 N/A N/A N/A 25.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129349 N/A 7.113±1.61 N/A N/A 9.359±5.43 8.791±0.74 N/A 2.390±0.00 0.842±0.04 3.183±0.46 1.008±0.00 4.920±1.35 1.674±0.00 N/A
ENSMUST00000141733 31.675±3.18 40.908±2.82 40.317±12.79 36.744±32.46 47.188±21.83 56.886±6.34 76.069±24.56 27.350±5.94 12.251±7.43 29.078±2.77 13.184±4.09 40.910±7.59 24.164±8.73 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006970 IDA response to osmotic stress

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166925 TSC22D4 TSC22 domain family, member 4 protein_coding Homo_sapiens

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