C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100540 Tsc22d4-001 ENSMUSG00000029723 10090 + 5:137745730-137768450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100540
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100540 3.434±0.50 4.305±0.00 1.581±0.00 3.947±0.00 6.159±0.00 2.477±0.01 1.697±1.36 2.741±0.27 4.064±1.36 5.125±1.76 4.925±0.00 2.377±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006970 IDA response to osmotic stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300181 TSC22D4-001 protein_coding Homo_sapiens 0 1264
ENST00000393991 TSC22D4-002 protein_coding Homo_sapiens 0 305
ENST00000423266 TSC22D4-006 protein_coding Homo_sapiens 0.00000000001 75
ENST00000456330 TSC22D4-005 protein_coding Homo_sapiens 0.00000000002 73
ENST00000493217 TSC22D4-003 retained_intron Homo_sapiens 0 1105
ENST00000496728 TSC22D4-004 processed_transcript Homo_sapiens 0 303

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