C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100539 Tsc22d4-002 ENSMUSG00000029723 10090 + 5:137745996-137761408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000100539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000100539 7.827±2.17 6.703±0.53 7.265±1.75 2.742±0.26 8.444±4.69 17.019±2.04 19.740±4.19 8.088±0.95 3.348±2.32 9.319±0.62 3.263±1.00 10.821±3.13 3.625±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006970 IDA response to osmotic stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300181 TSC22D4-001 protein_coding Homo_sapiens 0 1506
ENST00000393991 TSC22D4-002 protein_coding Homo_sapiens 0 634
ENST00000423266 TSC22D4-006 protein_coding Homo_sapiens 0 403
ENST00000456330 TSC22D4-005 protein_coding Homo_sapiens 0.00000000002 73
ENST00000493217 TSC22D4-003 retained_intron Homo_sapiens 0 1105
ENST00000496728 TSC22D4-004 processed_transcript Homo_sapiens 0 303

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