C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NOBOX oogenesis homeobox
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029736 Nobox 10090 - 6:43303674-43309554 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031749 Nobox-001 43303674-43309554 protein_coding
  ENSMUST00000172554 Nobox-002 43303898-43307236 protein_coding
  ENSMUST00000183706 Nobox-003 43303700-43305135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000031749ENSMUST00000172554ENSMUST00000183706
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000031749 0.021±0.01 0.064±0.02 0.039±0.02 0.004±0.00 N/A 0.030±0.00 0.038±0.01 0.019±0.01 0.065±0.04 5.523±2.01 0.066±0.07 0.052±0.02
ENSMUST00000172554 N/A N/A N/A 0.006±0.00 N/A N/A 0.014±0.00 0.029±0.01 N/A 2.232±0.85 0.097±0.05 0.019±0.01
ENSMUST00000183706 0.050±0.00 0.047±0.00 N/A 0.039±0.00 0.103±0.00 N/A 0.082±0.04 N/A N/A N/A N/A 0.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074U CIL_00074U_0002 CGP 6:43265582-43309554
CIL_0004XS CIL_0004XS_0002 CGP 6:43303674-43666278

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001541 IMP ovarian follicle development
GO:0003677 IDA DNA binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IC transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048477 IEA oogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086137 nobox NOBOX oogenesis homeobox protein_coding Danio_rerio
ENSG00000106410 NOBOX NOBOX oogenesis homeobox protein_coding Homo_sapiens

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