C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00074U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000050327-ENSG00000106410 CGP 9606 7:144355288-144410227
GeneTranscriptPositionBiotype
ENSG00000050327 (ARHGEF5)
Rho guanine nucleotide exchange factor (GEF) 5
ENST00000056217 (ARHGEF5-001) 144355340-144380632 protein_coding
ENST00000471847 (ARHGEF5-005) 144366133-144380056 protein_coding
ENST00000474817 (ARHGEF5-002) 144364909-144380631 protein_coding
ENST00000498580 (ARHGEF5-004) 144355288-144367339 protein_coding
CIL_00074U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033542-ENSMUSG00000029736 CGP 10090 6:43265582-43309554
GeneTranscriptPositionBiotype
ENSMUSG00000029736 (Nobox)
NOBOX oogenesis homeobox
ENSMUST00000031749 (Nobox-001) 43303674-43309554 protein_coding
ENSMUST00000172554 (Nobox-002) 43303898-43307236 protein_coding
ENSMUST00000183706 (Nobox-003) 43303700-43305135 protein_coding
ENSMUSG00000033542 (Arhgef5)
Rho guanine nucleotide exchange factor (GEF) 5
ENSMUST00000031750 (Arhgef5-001) 43265582-43289320 protein_coding
ENSMUST00000182190 (Arhgef5-005) 43279457-43289316 retained_intron
ENSMUST00000182647 (Arhgef5-008) 43282882-43284015 retained_intron
ENSMUST00000182752 (Arhgef5-007) 43280990-43283566 retained_intron
ENSMUST00000182924 (Arhgef5-002) 43274511-43289319 protein_coding
ENSMUST00000183094 (Arhgef5-004) 43277047-43287195 retained_intron
ENSMUST00000183227 (Arhgef5-003) 43276938-43279920 retained_intron
ENSMUST00000183313 (Arhgef5-006) 43282614-43289315 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074U_0001ENSG00000050327ENST00000056217ENST00000471847ENST00000474817ENST00000498580CIL_00074U_0002ENSMUSG00000029736ENSMUST00000031749ENSMUST00000172554ENSMUST00000183706ENSMUSG00000033542ENSMUST00000031750ENSMUST00000182190ENSMUST00000182647ENSMUST00000182752ENSMUST00000182924ENSMUST00000183094ENSMUST00000183227ENSMUST00000183313
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074U_0001ENSG00000050327ENST00000056217ENST00000471847ENST00000474817CIL_00074U_0002ENSMUSG00000029736ENSMUST00000031749ENSMUST00000172554ENSMUST00000183706ENSMUSG00000033542ENSMUST00000031750ENSMUST00000182190ENSMUST00000182924
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000050327 ENST00000056217 N/A N/A 0.613±0.00 0.017±0.00 0.366±0.00 0.898±0.00 0.121±0.00 0.208±0.00 N/A 0.449±0.00 0.023±0.00 0.519±0.00 0.724±0.11 0.188±0.00
ENST00000471847 N/A N/A 1.056±0.00 N/A 1.726±0.00 N/A N/A 0.564±0.00 1.257±0.00 1.849±0.00 0.072±0.00 4.370±0.00 3.514±0.00 1.381±0.00
ENST00000474817 1.726±0.00 1.104±0.00 0.504±0.00 0.404±0.00 3.085±0.00 1.371±0.45 0.116±0.00 6.665±0.00 1.793±0.00 2.344±0.00 N/A 4.369±3.26 2.493±0.68 1.843±0.00
ENST00000498580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029736 ENSMUST00000031749 0.021±0.01 0.064±0.02 0.039±0.02 0.004±0.00 N/A 0.030±0.00 N/A 0.038±0.01 0.019±0.01 0.065±0.04 N/A 5.523±2.01 0.066±0.07 0.052±0.02
ENSMUST00000172554 N/A N/A N/A 0.006±0.00 N/A N/A N/A 0.014±0.00 0.029±0.01 N/A N/A 2.232±0.85 0.097±0.05 0.019±0.01
ENSMUST00000183706 0.050±0.00 0.047±0.00 N/A 0.039±0.00 0.103±0.00 N/A N/A 0.082±0.04 N/A N/A N/A N/A N/A 0.078±0.00
ENSMUSG00000033542 ENSMUST00000031750 4.818±1.90 3.906±1.05 8.293±0.16 0.776±0.11 2.814±0.76 14.604±3.50 3.308±0.73 10.514±1.74 2.432±1.18 12.100±0.42 1.272±0.32 6.613±2.69 27.297±14.21 0.457±0.11
ENSMUST00000182190 1.805±0.84 N/A 6.459±0.63 0.331±0.00 N/A N/A N/A N/A 0.996±0.57 N/A 0.330±0.02 4.853±0.00 5.241±0.00 0.240±0.07
ENSMUST00000182647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182924 N/A N/A N/A 0.274±0.00 N/A N/A 1.025±0.00 3.845±0.40 1.093±0.32 N/A 0.501±0.01 2.960±0.00 N/A 0.169±0.00
ENSMUST00000183094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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