C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5'-nucleotidase, cytosolic III
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029780 Nt5c3 10090 - 6:56882400-56923932 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031793 Nt5c3-001 56882400-56923932 protein_coding
  ENSMUST00000101367 Nt5c3-003 56882400-56901886 protein_coding
  ENSMUST00000126137 Nt5c3-008 56886665-56889863 processed_transcript
  ENSMUST00000127725 Nt5c3-004 56895794-56901883 retained_intron
  ENSMUST00000134577 Nt5c3-007 56892801-56923857 processed_transcript
  ENSMUST00000135558 Nt5c3-006 56882984-56923876 processed_transcript
  ENSMUST00000138647 Nt5c3-005 56891539-56923890 processed_transcript
  ENSMUST00000152447 Nt5c3-002 56882951-56923819 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031793ENSMUST00000101367ENSMUST00000138647ENSMUST00000152447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031793 3.350±1.34 3.340±1.55 7.587±1.70 11.344±6.27 4.723±1.42 9.003±0.35 5.508±0.53 9.809±1.55 19.526±19.21 3.714±1.12 4.332±0.94 5.455±2.06 5.320±2.29 3.611±1.57
ENSMUST00000101367 N/A N/A 2.237±0.00 N/A 0.726±0.00 2.582±0.01 5.946±1.18 N/A 19.576±8.27 N/A 13.269±2.33 11.914±3.35 6.220±2.59 N/A
ENSMUST00000138647 N/A 10.215±4.39 N/A N/A 3.763±0.45 N/A N/A N/A 3.026±1.09 N/A N/A 6.683±2.87 N/A N/A
ENSMUST00000152447 N/A N/A N/A 4.754±0.00 N/A N/A N/A N/A N/A N/A N/A 1.234±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FA CIL_0003FA_0002 CGP 6:56832059-56923932

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0005737 ISS cytoplasm
GO:0005739 IDA mitochondrion
GO:0005783 ISS endoplasmic reticulum
GO:0008253 ISS 5'-nucleotidase activity
GO:0009117 IEA nucleotide metabolic process
GO:0016311 IEA dephosphorylation
GO:0016740 IEA transferase activity
GO:0046085 IEA adenosine metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058597 nt5c3a 5'-nucleotidase, cytosolic IIIA protein_coding Danio_rerio
ENSG00000122643 NT5C3A 5'-nucleotidase, cytosolic IIIA protein_coding Homo_sapiens

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