C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5'-nucleotidase, cytosolic III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152447 Nt5c3-002 ENSMUSG00000029780 10090 - 6:56882951-56923819 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENSMUST00000152447
Transcript ID Brain Ovary
ENSMUST00000152447 4.754±0.00 1.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FA CIL_0003FA_0002 CGP 6:56832059-56923932

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008253 ISS 5'-nucleotidase activity
GO:0016311 ISS dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242210 NT5C3A-001 protein_coding Homo_sapiens 0 948
ENST00000381626 NT5C3A-201 protein_coding Homo_sapiens 0 944
ENST00000394500 NT5C3AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 894
ENST00000396152 NT5C3A-004 protein_coding Homo_sapiens 0 1018
ENST00000405342 NT5C3A-202 protein_coding Homo_sapiens 0 1190
ENST00000409467 NT5C3A-003 protein_coding Homo_sapiens 0 935
ENST00000409787 NT5C3A-008 protein_coding Homo_sapiens 0 688
ENST00000416825 AC074338.5-001 processed_pseudogene Homo_sapiens 5e-33 143
ENST00000441170 NT5C3AP1-002 processed_transcript Homo_sapiens 0 904
ENST00000449201 NT5C3A-010 protein_coding Homo_sapiens 5.60519e-45 183
ENST00000456458 NT5C3A-002 nonsense_mediated_decay Homo_sapiens 0 1190
ENST00000461851 NT5C3A-007 retained_intron Homo_sapiens 0 302
ENST00000464840 NT5C3A-006 retained_intron Homo_sapiens 0 305
ENST00000473083 NT5C3A-009 retained_intron Homo_sapiens 0 322
ENST00000489836 RP11-402J7.2-001 processed_pseudogene Homo_sapiens 0.000000002 68
ENST00000610140 NT5C3A-011 protein_coding Homo_sapiens 0 948
ENST00000620705 NT5C3A-203 protein_coding Homo_sapiens 0 948

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