C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5'-nucleotidase, cytosolic IIIA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122643 NT5C3A 9606 - 7:33014114-33062797 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000242210 NT5C3A-001 33014148-33062797 protein_coding
  ENST00000381626 NT5C3A-201 33014114-33041165 protein_coding
  ENST00000396152 NT5C3A-004 33014139-33041155 protein_coding
  ENST00000405342 NT5C3A-202 33014114-33062797 protein_coding
  ENST00000409467 NT5C3A-003 33014730-33040909 protein_coding
  ENST00000409787 NT5C3A-008 33017204-33035983 protein_coding
  ENST00000449201 NT5C3A-010 33024081-33040909 protein_coding
  ENST00000456458 NT5C3A-002 33014130-33062796 nonsense_mediated_decay
  ENST00000461851 NT5C3A-007 33021826-33027033 retained_intron
  ENST00000464840 NT5C3A-006 33023719-33040907 retained_intron
  ENST00000473083 NT5C3A-009 33014720-33015926 retained_intron
  ENST00000497542 NT5C3A-005 33029231-33040910 retained_intron
  ENST00000610140 NT5C3A-011 33014130-33062779 protein_coding
  ENST00000620705 NT5C3A-203 33014114-33062797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000242210ENST00000396152ENST00000405342ENST00000409467ENST00000409787ENST00000456458ENST00000473083ENST00000610140ENST00000620705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000242210 3.491±0.00 1.400±0.00 N/A 0.851±0.00 1.866±0.00 N/A 0.903±0.00 N/A 0.891±0.00 N/A N/A 4.138±2.17 0.876±0.31 1.483±0.00
ENST00000396152 N/A N/A 0.583±0.00 0.456±0.00 0.676±0.00 4.291±0.00 0.320±0.00 N/A N/A N/A 1.556±0.00 3.007±0.00 N/A N/A
ENST00000405342 2.435±0.00 3.419±0.00 N/A 2.269±0.00 2.500±0.00 1.481±0.00 3.206±0.00 N/A N/A 5.093±0.00 11.276±0.00 3.951±2.25 1.793±0.49 5.469±0.00
ENST00000409467 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.188±0.00 N/A 3.150±0.00 N/A N/A
ENST00000409787 N/A N/A N/A 1.362±0.00 N/A N/A N/A N/A N/A N/A 1.510±0.00 13.286±0.00 2.860±0.00 2.884±0.00
ENST00000456458 N/A N/A N/A N/A 1.977±0.00 N/A 0.721±0.00 0.526±0.00 1.055±0.00 1.521±0.00 N/A 3.197±0.43 0.603±0.00 1.035±0.00
ENST00000473083 N/A N/A 5.466±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610140 N/A N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A 0.683±0.00 N/A 3.362±0.00 2.002±1.01 N/A
ENST00000620705 N/A 2.695±0.00 N/A 2.625±0.32 1.521±0.00 4.161±0.12 0.825±0.00 6.659±0.00 1.812±0.00 2.268±0.00 N/A 3.562±0.45 0.855±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FA CIL_0003FA_0001 CGP 7:32957404-33062797

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA:NAS magnesium ion binding
GO:0005737 IDA:IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005783 IDA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0006213 NAS pyrimidine nucleoside metabolic process
GO:0008253 IDA:IEA 5'-nucleotidase activity
GO:0008665 TAS 2'-phosphotransferase activity
GO:0009117 IEA nucleotide metabolic process
GO:0016311 IEA dephosphorylation
GO:0044281 TAS small molecule metabolic process
GO:0046085 IEA adenosine metabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058597 nt5c3a 5'-nucleotidase, cytosolic IIIA protein_coding Danio_rerio
ENSMUSG00000029780 Nt5c3 5'-nucleotidase, cytosolic III protein_coding Mus_musculus

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