C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hect domain and RLD 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029804 Herc3 10090 + 6:58831465-58920398 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031823 Herc3-002 58831861-58904081 protein_coding
  ENSMUST00000041401 Herc3-001 58833700-58920398 protein_coding
  ENSMUST00000122908 Herc3-007 58871774-58873842 processed_transcript
  ENSMUST00000122981 Herc3-004 58831503-58843714 protein_coding
  ENSMUST00000126292 Herc3-005 58831748-58854878 protein_coding
  ENSMUST00000131132 Herc3-008 58907262-58916823 processed_transcript
  ENSMUST00000141600 Herc3-003 58831465-58843728 protein_coding
  ENSMUST00000154290 Herc3-006 58862829-58873745 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031823ENSMUST00000041401ENSMUST00000122981ENSMUST00000126292
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031823 N/A N/A N/A 1.455±0.00 N/A N/A N/A N/A N/A N/A N/A 1.098±0.00 N/A N/A
ENSMUST00000041401 1.753±0.09 1.924±0.31 1.609±1.17 9.219±1.84 3.153±1.06 1.505±0.32 4.989±1.97 3.856±0.71 0.870±0.35 1.509±0.54 5.994±3.82 7.831±1.19 2.659±1.38 0.542±0.27
ENSMUST00000122981 N/A 3.701±1.38 N/A N/A N/A 2.163±0.64 N/A N/A N/A N/A N/A 4.489±0.00 N/A N/A
ENSMUST00000126292 N/A N/A N/A 90.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075887 herc3 hect domain and RLD 3 protein_coding Danio_rerio
ENSG00000138641 HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein_coding Homo_sapiens

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