C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hect domain and RLD 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041401 Herc3-001 ENSMUSG00000029804 10090 + 6:58833700-58920398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041401
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041401 1.753±0.09 1.924±0.31 1.609±1.17 9.219±1.84 3.153±1.06 1.505±0.32 4.989±1.97 3.856±0.71 0.870±0.35 1.509±0.54 5.994±3.82 7.831±1.19 2.659±1.38 0.542±0.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264345 HERC3-201 protein_coding Homo_sapiens 0 4076
ENST00000402738 HERC3-001 protein_coding Homo_sapiens 0 4076
ENST00000407637 HERC3-002 protein_coding Homo_sapiens 0 1328
ENST00000452979 HERC3-006 protein_coding Homo_sapiens 0 896
ENST00000470815 HERC3-007 retained_intron Homo_sapiens 2.8026e-45 185
ENST00000504994 HERC3-008 processed_transcript Homo_sapiens 0 257
ENST00000512194 HERC3-009 protein_coding Homo_sapiens 0 985

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