C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycoprotein (transmembrane) nmb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029816 Gpnmb 10090 + 6:49036518-49058182 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031840 Gpnmb-201 49036518-49058182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031840
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031840 6.099±1.50 0.313±0.05 13.760±2.81 0.265±0.11 5.205±1.35 1.257±0.28 0.806±0.37 0.374±0.10 0.115±0.07 8.584±0.93 0.364±0.13 9.667±4.01 5.901±4.28 1.213±1.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059M CIL_00059M_0002 CGP 6:49036518-49086751

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0005178 IDA integrin binding
GO:0005887 IDA integral component of plasma membrane
GO:0007155 IDA cell adhesion
GO:0008201 IDA heparin binding
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0030282 IEA bone mineralization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062688 gpnmb glycoprotein (transmembrane) nmb protein_coding Danio_rerio
ENSG00000136235 GPNMB glycoprotein (transmembrane) nmb protein_coding Homo_sapiens

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