C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily V, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029868 Trpv6 10090 - 6:41620621-41636405 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031902 Trpv6-201 41620621-41636405 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031902 1.077±1.05 0.043±0.01 0.126±0.01 0.445±0.03 0.474±0.25 3.784±0.74 0.018±0.00 0.276±0.07 0.037±0.02 1.119±0.31 0.018±0.00 1.683±1.10 5.344±4.70 0.581±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039T CIL_00039T_0002 CGP 6:41605482-41636405
CIL_0006VI CIL_0006VI_0002 CGP 6:41620621-41680723

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005262 IDA calcium channel activity
GO:0005516 IEA calmodulin binding
GO:0005886 IEA plasma membrane
GO:0006816 IDA calcium ion transport
GO:0016021 ISS integral component of membrane
GO:0070062 IEA extracellular vesicular exosome
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014496 trpv6 transient receptor potential cation channel, subfamily V, member 6 protein_coding Danio_rerio
ENSG00000165125 TRPV6 transient receptor potential cation channel, subfamily V, member 6 protein_coding Homo_sapiens

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