C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, matrin-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030016 Zfml 10090 + 6:83914353-83986869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032088 Zfml-201 83914353-83986869 protein_coding
  ENSMUST00000113835 Zfml-202 83914353-83986869 protein_coding
  ENSMUST00000113836 Zfml-203 83914390-83986869 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032088ENSMUST00000113835ENSMUST00000113836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032088 N/A 0.434±0.00 3.187±0.33 10.307±4.61 0.741±0.33 0.672±0.12 N/A 0.608±0.00 1.467±0.62 0.555±0.00 1.639±0.83 5.556±5.83 4.101±2.37 0.950±0.57
ENSMUST00000113835 1.038±0.00 1.591±0.00 N/A 1.774±0.00 1.063±0.12 1.443±0.00 N/A 0.485±0.00 0.659±0.28 N/A N/A 2.599±0.65 2.036±0.00 0.937±0.33
ENSMUST00000113836 0.616±0.00 1.346±0.21 N/A N/A 1.216±0.13 0.981±0.55 0.491±0.00 N/A N/A 1.104±0.24 N/A 1.508±0.81 N/A 1.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003C3 CIL_0003C3_0002 CGP 6:83805401-83986869
CIL_00082S CIL_00082S_0002 VISTA 6:83890934-84492863
CIL_00083T CIL_00083T_0002 VISTA 6:83896001-84498367
CIL_0003BS CIL_0003BS_0002 CGP 6:83914353-84211060

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000075292 ZNF638 zinc finger protein 638 protein_coding Homo_sapiens

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