C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, matrin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113835 Zfml-202 ENSMUSG00000030016 10090 + 6:83914353-83986869 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000113835
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000113835 1.038±0.00 1.591±0.00 1.774±0.00 1.063±0.12 1.443±0.00 0.485±0.00 0.659±0.28 2.599±0.65 2.036±0.00 0.937±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003C3 CIL_0003C3_0002 CGP 6:83805401-83986869
CIL_00082S CIL_00082S_0002 VISTA 6:83890934-84492863
CIL_00083T CIL_00083T_0002 VISTA 6:83896001-84498367
CIL_0003BS CIL_0003BS_0002 CGP 6:83914353-84211060

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264447 ZNF638-001 protein_coding Homo_sapiens 0 2889
ENST00000409407 ZNF638-018 processed_transcript Homo_sapiens 0 797
ENST00000409544 ZNF638-002 protein_coding Homo_sapiens 0 2839
ENST00000410075 ZNF638-003 protein_coding Homo_sapiens 0 2817
ENST00000417778 ZNF638-013 protein_coding Homo_sapiens 0 460
ENST00000437658 ZNF638-006 protein_coding Homo_sapiens 0 1273
ENST00000454122 ZNF638-007 protein_coding Homo_sapiens 0 488
ENST00000454278 ZNF638-014 protein_coding Homo_sapiens 0 604
ENST00000455226 ZNF638-012 protein_coding Homo_sapiens 0 604
ENST00000460310 ZNF638-025 retained_intron Homo_sapiens 0 248
ENST00000461991 ZNF638-023 protein_coding Homo_sapiens 0 431
ENST00000464375 ZNF638-010 protein_coding Homo_sapiens 0 466
ENST00000466330 ZNF638-005 protein_coding Homo_sapiens 0 453
ENST00000466975 ZNF638-004 protein_coding Homo_sapiens 0 359
ENST00000472758 ZNF638-022 retained_intron Homo_sapiens 0 512
ENST00000475743 ZNF638-011 protein_coding Homo_sapiens 0 442
ENST00000483421 ZNF638-019 retained_intron Homo_sapiens 0 797
ENST00000487638 ZNF638-017 retained_intron Homo_sapiens 0 861
ENST00000487707 ZNF638-008 processed_transcript Homo_sapiens 3e-31 139
ENST00000488126 ZNF638-024 retained_intron Homo_sapiens 0 678
ENST00000493576 ZNF638-020 protein_coding Homo_sapiens 0 678
ENST00000494621 ZNF638-009 protein_coding Homo_sapiens 0 556

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