C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prickle homolog 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030020 Prickle2 10090 - 6:92370892-92706145 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032093 Prickle2-201 92370892-92706145 protein_coding
  ENSMUST00000113445 Prickle2-002 92375384-92481392 protein_coding
  ENSMUST00000113446 Prickle2-003 92370910-92534861 protein_coding
  ENSMUST00000113447 Prickle2-001 92370908-92567366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032093ENSMUST00000113445ENSMUST00000113446ENSMUST00000113447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032093 0.152±0.00 0.491±0.18 N/A 3.400±2.26 0.466±0.23 1.154±0.44 N/A 0.324±0.02 0.064±0.00 2.494±0.45 N/A 0.778±0.19 0.146±0.09 0.133±0.03
ENSMUST00000113445 1.786±1.36 0.675±0.24 N/A N/A 0.483±0.12 0.967±0.24 0.400±0.10 0.428±0.09 0.155±0.01 4.852±1.12 N/A 1.845±0.44 N/A 0.445±0.17
ENSMUST00000113446 2.614±1.87 0.845±0.26 3.811±0.37 N/A 0.740±0.39 0.999±0.32 0.323±0.15 0.282±0.08 0.091±0.04 2.614±0.47 0.154±0.00 1.863±0.89 0.329±0.17 0.142±0.00
ENSMUST00000113447 0.701±0.00 N/A N/A 9.095±0.00 0.893±0.00 0.243±0.00 0.446±0.18 0.346±0.06 0.179±0.08 N/A 0.280±0.04 1.370±0.81 0.275±0.19 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000791 CIL_000791_0002 CGP 6:92370892-92943492

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016327 IDA apicolateral plasma membrane
GO:0016328 IDA lateral plasma membrane
GO:0031175 IMP neuron projection development
GO:0045197 IDA establishment or maintenance of epithelial cell apical/basal polarity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020982 PRICKLE2 (1 of 2) prickle homolog 2 (Drosophila) protein_coding Danio_rerio
ENSDARG00000037593 prickle2 prickle-like 2 (Drosophila) protein_coding Danio_rerio
ENSG00000163637 PRICKLE2 prickle homolog 2 (Drosophila) protein_coding Homo_sapiens

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