C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prickle homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113447 Prickle2-001 ENSMUSG00000030020 10090 - 6:92370908-92567366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000113447
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000113447 0.701±0.00 9.095±0.00 0.893±0.00 0.243±0.00 0.446±0.18 0.346±0.06 0.179±0.08 0.280±0.04 1.370±0.81 0.275±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000791 CIL_000791_0002 CGP 6:92370892-92943492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0016327 IDA apicolateral plasma membrane
GO:0016328 IDA lateral plasma membrane
GO:0031175 IMP neuron projection development
GO:0045197 IDA establishment or maintenance of epithelial cell apical/basal polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295902 PRICKLE2-001 protein_coding Homo_sapiens 0 4137
ENST00000498162 PRICKLE2-002 protein_coding Homo_sapiens 0 689
ENST00000564377 PRICKLE2-003 protein_coding Homo_sapiens 0 4137
ENST00000569824 PRICKLE2-004 protein_coding Homo_sapiens 0 270

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