C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: plexin A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030084 Plxna1 10090 - 6:89316316-89362613 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049845 Plxna1-201 89319015-89357717 protein_coding
  ENSMUST00000163139 Plxna1-202 89316316-89362613 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049845ENSMUST00000163139
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049845 N/A N/A N/A 4.496±0.00 N/A N/A N/A N/A 0.902±0.00 N/A N/A 9.969±0.07 1.888±0.00 0.855±0.00
ENSMUST00000163139 22.738±2.83 37.545±3.57 11.215±1.42 22.577±22.83 18.801±8.65 13.183±2.16 7.450±0.83 11.563±1.27 2.069±0.62 43.150±20.88 3.127±0.71 36.148±12.83 9.815±3.78 7.107±3.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EC CIL_0008EC_0002 VISTA 6:88734676-89336253
CIL_0005JO CIL_0005JO_0002 CGP 6:89316316-89595652

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 TAS plasma membrane
GO:0014910 IMP regulation of smooth muscle cell migration
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0017154 IPI semaphorin receptor activity
GO:0060666 IDA dichotomous subdivision of terminal units involved in salivary gland branching
GO:0070062 IEA extracellular vesicular exosome
GO:0071526 IPI semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075483 PLXNA1 plexin A1 protein_coding Danio_rerio
ENSDARG00000078641 plexin A1 protein_coding Danio_rerio
ENSG00000114554 PLXNA1 plexin A1 protein_coding Homo_sapiens

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