C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sulfatase modifying factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032191 Sumf1-001 ENSMUSG00000030101 10090 - 6:108107028-108185582 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032191
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032191 9.738±1.37 5.463±0.87 14.456±0.02 4.027±1.96 4.837±1.05 3.592±1.14 2.919±0.16 10.500±0.54 5.161±0.64 9.429±1.49 3.488±0.35 7.305±3.60 12.929±3.84 1.781±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TR CIL_0004TR_0002 CGP 6:108107028-108551109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0016491 IEA oxidoreductase activity
GO:0042803 IPI protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272902 SUMF1-001 protein_coding Homo_sapiens 0 1234
ENST00000383843 SUMF1-005 protein_coding Homo_sapiens 0 813
ENST00000405420 SUMF1-002 protein_coding Homo_sapiens 0 948
ENST00000448413 SUMF1-004 nonsense_mediated_decay Homo_sapiens 0 1033

Loading