C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030107 Usp18 10090 + 6:121245906-121270916 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032198 Usp18-201 121245906-121270916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032198
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032198 4.632±2.02 7.586±0.98 7.778±1.28 0.148±0.05 6.476±1.47 0.773±0.20 1.190±0.19 3.139±0.96 9.677±6.06 6.857±0.81 0.725±0.24 4.403±1.54 8.599±3.74 0.216±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EW CIL_0005EW_0002 CGP 6:121210734-121270916

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019785 IMP ISG15-specific protease activity
GO:0032020 IMP ISG15-protein conjugation
GO:0035634 IEP response to stilbenoid
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088078 CU571169.4 Uncharacterized protein protein_coding Danio_rerio
ENSG00000161133 USP41 ubiquitin specific peptidase 41 protein_coding Homo_sapiens
ENSG00000184979 USP18 ubiquitin specific peptidase 18 protein_coding Homo_sapiens

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