C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005EW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183785-ENSG00000184979 CGP 9606 22:18110331-18177397
GeneTranscriptPositionBiotype
ENSG00000184979 (USP18)
ubiquitin specific peptidase 18
ENST00000215794 (USP18-001) 18149899-18177397 protein_coding
ENSG00000215193 (PEX26)
peroxisomal biogenesis factor 26
ENST00000329627 (PEX26-001) 18077923-18105396 protein_coding
ENST00000399744 (PEX26-002) 18078008-18088460 protein_coding
ENST00000428061 (PEX26-003) 18078377-18088119 protein_coding
ENST00000474897 (PEX26-004) 18078015-18131138 nonsense_mediated_decay
ENST00000610387 (PEX26-201) 18077920-18091019 protein_coding
ENST00000618979 (PEX26-202) 18077994-18091030 protein_coding
ENSG00000280007 (AC008079.10)
ENST00000623543 (AC008079.10-001) 18110759-18131154 antisense
CIL_0005EW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030137-ENSMUSG00000030107 CGP 10090 6:121210734-121270916
GeneTranscriptPositionBiotype
ENSMUSG00000030107 (Usp18)
ubiquitin specific peptidase 18
ENSMUST00000032198 (Usp18-201) 121245906-121270916 protein_coding
ENSMUSG00000030137 (Tuba8)
tubulin, alpha 8
ENSMUST00000032233 (Tuba8-001) 121210734-121226854 protein_coding
ENSMUSG00000086527 (Gm15856)
predicted gene 15856
ENSMUST00000124853 (Gm15856-001) 121223692-121226153 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EW_0001ENSG00000184979ENST00000215794ENSG00000215193ENST00000329627ENST00000399744ENST00000428061ENST00000474897ENST00000610387ENST00000618979ENSG00000280007ENST00000623543CIL_0005EW_0002ENSMUSG00000030107ENSMUST00000032198ENSMUSG00000030137ENSMUST00000032233ENSMUSG00000086527ENSMUST00000124853
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EW_0001ENSG00000184979ENST00000215794ENSG00000215193ENST00000329627ENST00000399744ENST00000610387ENST00000618979ENSG00000280007ENST00000623543CIL_0005EW_0002ENSMUSG00000030107ENSMUST00000032198ENSMUSG00000030137ENSMUST00000032233ENSMUSG00000086527ENSMUST00000124853
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184979 ENST00000215794 1.728±0.00 2.509±0.00 0.219±0.00 0.402±0.18 2.715±1.52 0.409±0.25 0.503±0.45 2.237±0.00 1.966±1.37 1.462±0.00 0.652±0.00 2.744±1.80 4.000±0.69 2.554±1.05
ENSG00000215193 ENST00000329627 0.922±0.00 1.307±0.00 0.206±0.00 1.568±0.00 1.333±0.00 0.816±0.00 0.446±0.26 0.853±0.46 0.418±0.27 0.408±0.24 0.860±0.00 0.973±0.05 0.440±0.12 0.708±0.14
ENST00000399744 N/A N/A N/A 2.334±0.00 N/A N/A N/A 1.775±0.00 N/A 1.112±0.00 N/A N/A N/A N/A
ENST00000428061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610387 3.056±0.00 3.300±0.00 N/A N/A N/A 3.073±0.44 N/A 4.272±0.00 3.101±2.08 N/A 3.892±0.00 2.117±0.25 2.382±0.00 3.171±0.00
ENST00000618979 4.333±0.00 4.302±0.00 0.868±0.00 4.229±2.47 3.849±2.23 1.518±0.00 4.177±0.00 2.977±2.26 4.673±0.00 2.765±2.31 N/A 4.535±0.16 3.473±1.25 2.765±0.27
ENSG00000280007 ENST00000623543 0.276±0.00 0.432±0.00 0.073±0.00 0.904±0.66 0.338±0.22 0.197±0.00 1.560±1.02 N/A 0.090±0.00 0.117±0.00 1.674±0.30 N/A N/A 1.405±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030107 ENSMUST00000032198 4.632±2.02 7.586±0.98 7.778±1.28 0.148±0.05 6.476±1.47 0.773±0.20 1.190±0.19 3.139±0.96 9.677±6.06 6.857±0.81 0.725±0.24 4.403±1.54 8.599±3.74 0.216±0.15
ENSMUSG00000030137 ENSMUST00000032233 0.490±0.08 1.104±0.20 1.320±0.34 0.661±0.85 4.013±2.15 0.048±0.02 23.816±2.46 0.625±0.26 0.847±0.15 3.041±1.48 44.170±21.53 0.289±0.12 0.475±0.32 36.560±19.73
ENSMUSG00000086527 ENSMUST00000124853 N/A N/A N/A 0.775±0.00 N/A 0.073±0.00 N/A N/A N/A N/A 19.305±1.58 0.150±0.04 0.180±0.11 N/A

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