C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 248
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030145 Zfp248 10090 - 6:118427319-118455528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000069292 Zfp248-001 118427319-118455528 protein_coding
  ENSMUST00000159254 Zfp248-006 118453168-118454756 processed_transcript
  ENSMUST00000159403 Zfp248-004 118433383-118455065 protein_coding
  ENSMUST00000161176 Zfp248-003 118453132-118455471 retained_intron
  ENSMUST00000161519 Zfp248-002 118428687-118455498 protein_coding
  ENSMUST00000162275 Zfp248-005 118433305-118455419 processed_transcript
  ENSMUST00000189168 Zfp248-007 118453099-118455502 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069292ENSMUST00000161519ENSMUST00000189168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069292 0.252±0.07 0.753±0.16 0.372±0.01 1.616±1.42 0.436±0.19 0.291±0.14 N/A 0.257±0.11 0.200±0.11 0.326±0.16 0.102±0.02 0.919±0.53 0.531±0.34 0.309±0.00
ENSMUST00000161519 N/A N/A N/A 0.636±0.00 0.209±0.00 0.171±0.00 0.183±0.03 N/A 0.216±0.00 N/A 0.109±0.02 0.833±0.08 0.843±0.35 N/A
ENSMUST00000189168 N/A 11.182±1.20 N/A N/A 1.315±0.29 0.574±0.41 N/A 0.928±0.00 0.086±0.03 0.361±0.01 N/A 0.729±0.00 N/A 2.724±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R3 CIL_0000R3_0002 CGP 6:118427319-118479320

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198105 ZNF248 zinc finger protein 248 protein_coding Homo_sapiens

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