C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 1b2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030236 Slco1b2 10090 + 6:141629518-141686646 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042812 Slco1b2-001 141629518-141686646 protein_coding
  ENSMUST00000160179 Slco1b2-003 141681246-141685609 retained_intron
  ENSMUST00000162675 Slco1b2-002 141652255-141656906 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000042812ENSMUST00000160179ENSMUST00000162675
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000042812 0.034±0.00 0.004±0.00 0.019±0.01 0.253±0.19 0.014±0.01 0.022±0.01 34.164±35.03 0.074±0.03 0.022±0.01 0.216±0.00 0.466±0.37
ENSMUST00000160179 N/A N/A 0.306±0.00 0.549±0.00 N/A N/A N/A 0.194±0.00 N/A 0.636±0.00 3.506±0.00
ENSMUST00000162675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PX CIL_0005PX_0002 CGP 6:141524386-141686646
CIL_0005PW CIL_0005PW_0002 CGP 6:141629518-141773810

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IEA liver development
GO:0005886 IEA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006855 IEA drug transmembrane transport
GO:0006857 IEA oligopeptide transport
GO:0008514 ISS organic anion transmembrane transporter activity
GO:0015125 IEA bile acid transmembrane transporter activity
GO:0015198 IEA oligopeptide transporter activity
GO:0015238 IEA drug transmembrane transporter activity
GO:0015721 IEA bile acid and bile salt transport
GO:0015893 IEA drug transport
GO:0016323 IEA basolateral plasma membrane
GO:0032496 IEA response to lipopolysaccharide
GO:0033993 IEA response to lipid
GO:0034097 IEA response to cytokine
GO:0042493 IEA response to drug
GO:0043434 IEA response to peptide hormone
GO:0046677 IEA response to antibiotic
GO:0051384 IEA response to glucocorticoid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000111700 SLCO1B3 solute carrier organic anion transporter family, member 1B3 protein_coding Homo_sapiens
ENSG00000134538 SLCO1B1 solute carrier organic anion transporter family, member 1B1 protein_coding Homo_sapiens
ENSG00000205754 SLCO1B7 solute carrier organic anion transporter family, member 1B7 (non-functional) protein_coding Homo_sapiens
ENSG00000257046 SLCO1B3 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000370952} protein_coding Homo_sapiens
ENSG00000257062 RP11-125O5.2 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000467594} protein_coding Homo_sapiens

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