C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134538-ENSG00000084453 CGP 9606 12:21131202-21419594
GeneTranscriptPositionBiotype
ENSG00000084453 (SLCO1A2)
solute carrier organic anion transporter family, member 1A2 		ENST00000307378 (SLCO1A2-001) 21264600-21395437 protein_coding
ENST00000413682 (SLCO1A2-008) 21304523-21418016 protein_coding
ENST00000416627 (SLCO1A2-015) 21334609-21395397 protein_coding
ENST00000421287 (SLCO1A2-013) 21318831-21395397 protein_coding
ENST00000421294 (SLCO1A2-011) 21314585-21334913 protein_coding
ENST00000422327 (SLCO1A2-012) 21306882-21334907 protein_coding
ENST00000430803 (SLCO1A2-014) 21334643-21395397 protein_coding
ENST00000435179 (SLCO1A2-007) 21314620-21419584 protein_coding
ENST00000445053 (SLCO1A2-005) 21314664-21334895 protein_coding
ENST00000450590 (SLCO1A2-010) 21314611-21403657 protein_coding
ENST00000453443 (SLCO1A2-009) 21306914-21403663 protein_coding
ENST00000458504 (SLCO1A2-002) 21269414-21334900 protein_coding
ENST00000463718 (SLCO1A2-003) 21274903-21324736 retained_intron
ENST00000473830 (SLCO1A2-006) 21311627-21419594 processed_transcript
ENST00000480394 (SLCO1A2-004) 21273942-21324681 retained_intron
ENST00000544020 (SLCO1A2-016) 21269338-21334671 nonsense_mediated_decay
ENST00000544290 (SLCO1A2-017) 21269459-21395261 nonsense_mediated_decay
ENSG00000121351 (IAPP)
islet amyloid polypeptide 		ENST00000240652 (IAPP-001) 21372884-21379978 protein_coding
ENST00000535428 (IAPP-004) 21373407-21378629 protein_coding
ENST00000537593 (IAPP-003) 21372928-21378395 protein_coding
ENST00000539393 (IAPP-005) 21354959-21378495 protein_coding
ENST00000542023 (IAPP-002) 21372919-21379978 protein_coding
ENSG00000134538 (SLCO1B1)
solute carrier organic anion transporter family, member 1B1 		ENST00000256958 (SLCO1B1-001) 21131202-21239246 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0005PW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030236-ENSMUSG00000084927 CGP 10090 6:141629518-141773810
GeneTranscriptPositionBiotype
ENSMUSG00000030236 (Slco1b2)
solute carrier organic anion transporter family, member 1b2 		ENSMUST00000042812 (Slco1b2-001) 141629518-141686646 protein_coding
ENSMUST00000160179 (Slco1b2-003) 141681246-141685609 retained_intron
ENSMUST00000162675 (Slco1b2-002) 141652255-141656906 retained_intron
ENSMUSG00000084927 (Gm5724)
predicted gene 5724 		ENSMUST00000148411 (Gm5724-001) 141708118-141773810 protein_coding
ENSMUSG00000088865 (Gm23069)
predicted gene, 23069 		ENSMUST00000158240 (Gm23069-201) 141714781-141715091 misc_RNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PW_0001ENSG00000084453ENST00000307378ENST00000413682ENST00000416627ENST00000421287ENST00000421294ENST00000422327ENST00000430803ENST00000435179ENST00000445053ENST00000450590ENST00000453443ENST00000458504ENST00000463718ENST00000473830ENST00000480394ENST00000544020ENST00000544290ENSG00000121351ENST00000240652ENST00000535428ENST00000537593ENST00000539393ENST00000542023ENSG00000134538ENST00000256958CIL_0005PW_0002ENSMUSG00000030236ENSMUST00000042812ENSMUST00000160179ENSMUST00000162675ENSMUSG00000084927ENSMUST00000148411ENSMUSG00000088865ENSMUST00000158240
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PW_0001ENSG00000084453ENST00000307378ENST00000416627ENST00000421294ENST00000430803ENST00000435179ENST00000450590ENST00000458504ENST00000463718ENST00000480394ENST00000544290ENSG00000121351ENST00000240652ENST00000535428ENST00000537593ENST00000539393ENSG00000134538ENST00000256958CIL_0005PW_0002ENSMUSG00000030236ENSMUST00000042812ENSMUST00000160179ENSMUST00000162675ENSMUSG00000084927ENSMUST00000148411ENSMUSG00000088865ENSMUST00000158240
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084453 ENST00000307378 N/A N/A 0.055±0.00 N/A N/A N/A 0.004±0.00 0.438±0.00 0.040±0.00 N/A N/A 0.012±0.00 0.026±0.01 0.034±0.02
ENST00000413682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416627 0.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.313±0.00
ENST00000421287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A
ENST00000422327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430803 N/A N/A N/A N/A N/A 0.142±0.00 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000435179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A N/A
ENST00000445053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450590 N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458504 N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 0.123±0.00 0.307±0.00 N/A 0.004±0.00 N/A N/A
ENST00000463718 0.024±0.00 N/A 0.085±0.00 N/A 0.210±0.00 0.034±0.00 0.010±0.00 N/A 0.062±0.00 0.099±0.00 0.017±0.00 0.012±0.00 N/A 0.117±0.00
ENST00000473830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480394 N/A N/A N/A 2.901±0.00 N/A N/A N/A 2.582±0.00 0.050±0.00 N/A N/A N/A 0.023±0.00 N/A
ENST00000544020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00
ENSG00000121351 ENST00000240652 0.005±0.00 0.119±0.00 N/A 0.033±0.00 0.026±0.00 N/A 0.041±0.00 0.037±0.00 0.004±0.00 0.019±0.00 N/A 0.013±0.00 N/A 0.027±0.00
ENST00000535428 N/A N/A N/A N/A N/A N/A N/A 2.437±0.00 N/A N/A N/A N/A N/A 0.430±0.00
ENST00000537593 N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000539393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.234±0.06
ENST00000542023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134538 ENST00000256958 N/A N/A 0.054±0.00 0.023±0.01 0.248±0.00 N/A N/A 141.092±0.00 8.968±8.95 N/A N/A N/A N/A 0.059±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030236 ENSMUST00000042812 0.034±0.00 N/A 0.004±0.00 0.019±0.01 0.253±0.19 N/A 0.014±0.01 0.022±0.01 34.164±35.03 0.074±0.03 0.022±0.01 0.216±0.00 0.466±0.37 N/A
ENSMUST00000160179 N/A N/A N/A 0.306±0.00 0.549±0.00 N/A N/A N/A N/A 0.194±0.00 N/A 0.636±0.00 3.506±0.00 N/A
ENSMUST00000162675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A
ENSMUSG00000084927 ENSMUST00000148411 N/A N/A 0.009±0.00 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 0.261±0.24
ENSMUSG00000088865 ENSMUST00000158240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 0.216±0.00

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