C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139155-ENSG00000111700 CGP 9606 12:20695355-20916911
GeneTranscriptPositionBiotype
ENSG00000111700 (SLCO1B3)
solute carrier organic anion transporter family, member 1B3 		ENST00000261196 (SLCO1B3-201) 20815672-20916911 protein_coding
ENST00000381545 (SLCO1B3-001) 20810726-20916724 protein_coding
ENST00000540853 (SLCO1B3-003) 20810702-20875381 protein_coding
ENST00000544370 (SLCO1B3-005) 20862459-20902333 protein_coding
ENST00000545880 (SLCO1B3-004) 20855092-20861054 processed_transcript
ENSG00000139155 (SLCO1C1)
solute carrier organic anion transporter family, member 1C1 		ENST00000266509 (SLCO1C1-001) 20695465-20753386 protein_coding
ENST00000497911 (SLCO1C1-009) 20695561-20700239 retained_intron
ENST00000534996 (SLCO1C1-006) 20695355-20696975 processed_transcript
ENST00000535609 (SLCO1C1-007) 20695571-20697496 processed_transcript
ENST00000539415 (SLCO1C1-003) 20695431-20752696 nonsense_mediated_decay
ENST00000539443 (SLCO1C1-008) 20695750-20696943 processed_transcript
ENST00000540354 (SLCO1C1-002) 20695462-20752817 protein_coding
ENST00000545102 (SLCO1C1-004) 20695597-20753214 protein_coding
ENST00000545604 (SLCO1C1-010) 20695480-20752613 protein_coding
ENSG00000256157 (RP11-80N2.2)
 ENST00000545978 (RP11-80N2.2-001) 20845065-20845260 processed_pseudogene
CIL_0005PX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030235-ENSMUSG00000030236 CGP 10090 6:141524386-141686646
GeneTranscriptPositionBiotype
ENSMUSG00000030235 (Slco1c1)
solute carrier organic anion transporter family, member 1c1 		ENSMUST00000032362 (Slco1c1-001) 141524386-141570177 protein_coding
ENSMUST00000135562 (Slco1c1-002) 141524386-141569720 nonsense_mediated_decay
ENSMUSG00000030236 (Slco1b2)
solute carrier organic anion transporter family, member 1b2 		ENSMUST00000042812 (Slco1b2-001) 141629518-141686646 protein_coding
ENSMUST00000160179 (Slco1b2-003) 141681246-141685609 retained_intron
ENSMUST00000162675 (Slco1b2-002) 141652255-141656906 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PX_0001ENSG00000111700ENST00000261196ENST00000381545ENST00000540853ENST00000544370ENST00000545880ENSG00000139155ENST00000266509ENST00000497911ENST00000534996ENST00000535609ENST00000539415ENST00000539443ENST00000540354ENST00000545102ENST00000545604ENSG00000256157ENST00000545978CIL_0005PX_0002ENSMUSG00000030235ENSMUST00000032362ENSMUST00000135562ENSMUSG00000030236ENSMUST00000042812ENSMUST00000160179ENSMUST00000162675
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PX_0001ENSG00000111700ENST00000261196ENST00000381545ENST00000540853ENST00000544370ENSG00000139155ENST00000266509ENST00000497911ENST00000534996ENST00000535609ENST00000539415ENST00000539443ENST00000540354ENST00000545102ENST00000545604ENSG00000256157ENST00000545978CIL_0005PX_0002ENSMUSG00000030235ENSMUST00000032362ENSMUST00000135562ENSMUSG00000030236ENSMUST00000042812ENSMUST00000160179ENSMUST00000162675
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111700 ENST00000261196 N/A N/A N/A 0.019±0.00 N/A N/A N/A 59.425±0.00 13.437±0.00 N/A N/A 0.340±0.06 N/A N/A
ENST00000381545 0.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.220±0.00 N/A 0.064±0.02
ENST00000540853 N/A N/A N/A 0.025±0.00 0.269±0.00 N/A N/A N/A N/A N/A N/A 1.009±0.00 N/A 0.101±0.00
ENST00000544370 N/A N/A N/A 0.020±0.00 N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.432±0.00 N/A N/A
ENST00000545880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139155 ENST00000266509 N/A N/A N/A 4.140±0.00 N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A
ENST00000497911 N/A N/A N/A N/A 0.630±0.00 0.430±0.00 0.120±0.00 N/A 0.243±0.00 0.301±0.00 N/A 0.173±0.00 0.043±0.00 N/A
ENST00000534996 N/A N/A N/A N/A N/A 0.113±0.00 0.211±0.00 0.027±0.00 0.276±0.00 N/A N/A N/A 0.099±0.01 N/A
ENST00000535609 0.043±0.00 0.217±0.00 N/A N/A 0.318±0.04 0.229±0.00 0.331±0.00 N/A N/A N/A N/A 0.074±0.00 N/A N/A
ENST00000539415 0.091±0.00 0.126±0.00 N/A N/A N/A N/A N/A N/A 0.024±0.02 0.302±0.00 N/A N/A 0.029±0.00 0.249±0.00
ENST00000539443 N/A N/A N/A N/A 5.956±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540354 N/A N/A N/A 1.638±0.00 0.170±0.00 0.013±0.00 N/A N/A N/A 0.143±0.00 N/A 0.061±0.00 N/A 0.085±0.00
ENST00000545102 N/A N/A N/A 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A
ENST00000545604 N/A N/A N/A 1.094±0.09 0.167±0.02 0.035±0.00 0.069±0.03 N/A N/A N/A N/A 0.056±0.00 N/A 0.222±0.00
ENSG00000256157 ENST00000545978 N/A N/A 1.235±0.00 N/A N/A N/A N/A 11.383±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030235 ENSMUST00000032362 N/A N/A 0.018±0.00 1.095±0.46 N/A N/A 0.037±0.00 N/A N/A N/A 0.039±0.01 N/A 0.013±0.01 N/A
ENSMUST00000135562 0.027±0.02 0.077±0.05 0.020±0.02 2.676±1.73 0.093±0.06 0.078±0.00 0.074±0.03 0.039±0.02 0.016±0.01 0.088±0.05 0.022±0.00 0.068±0.03 0.028±0.00 0.014±0.00
ENSMUSG00000030236 ENSMUST00000042812 0.034±0.00 N/A 0.004±0.00 0.019±0.01 0.253±0.19 N/A 0.014±0.01 0.022±0.01 34.164±35.03 0.074±0.03 0.022±0.01 0.216±0.00 0.466±0.37 N/A
ENSMUST00000160179 N/A N/A N/A 0.306±0.00 0.549±0.00 N/A N/A N/A N/A 0.194±0.00 N/A 0.636±0.00 3.506±0.00 N/A
ENSMUST00000162675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A

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